Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH20Q8N6Y1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
PCDH20Q8N6Y1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.52■■□□□ 1.04
PCDH20Q8N6Y1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.52■■□□□ 1.04
PCDH20Q8N6Y1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH20Q8N6Y1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH20Q8N6Y1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.52■■□□□ 1.04
PCDH20Q8N6Y1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH20Q8N6Y1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH20Q8N6Y1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.52■■□□□ 1.04
PCDH20Q8N6Y1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PCDH20Q8N6Y1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH20Q8N6Y1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH20Q8N6Y1 PKD1P6-201ENST00000343738 4769 ntBASIC21.52■■□□□ 1.03
PCDH20Q8N6Y1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PCDH20Q8N6Y1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PCDH20Q8N6Y1 AC003102.1-202ENST00000563394 1796 ntBASIC21.51■■□□□ 1.03
PCDH20Q8N6Y1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH20Q8N6Y1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PCDH20Q8N6Y1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH20Q8N6Y1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PCDH20Q8N6Y1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH20Q8N6Y1 FAM99A-202ENST00000538190 1989 ntBASIC21.51■■□□□ 1.03
PCDH20Q8N6Y1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH20Q8N6Y1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH20Q8N6Y1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDH20Q8N6Y1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH20Q8N6Y1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH20Q8N6Y1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDH20Q8N6Y1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.51■■□□□ 1.03
PCDH20Q8N6Y1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDH20Q8N6Y1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDH20Q8N6Y1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH20Q8N6Y1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH20Q8N6Y1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH20Q8N6Y1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.51■■□□□ 1.03
PCDH20Q8N6Y1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH20Q8N6Y1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDH20Q8N6Y1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH20Q8N6Y1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH20Q8N6Y1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH20Q8N6Y1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDH20Q8N6Y1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH20Q8N6Y1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH20Q8N6Y1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH20Q8N6Y1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PCDH20Q8N6Y1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDH20Q8N6Y1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDH20Q8N6Y1 KRT18P20-201ENST00000548986 1279 ntBASIC21.5■■□□□ 1.03
PCDH20Q8N6Y1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.5■■□□□ 1.03
PCDH20Q8N6Y1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.5■■□□□ 1.03
PCDH20Q8N6Y1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH20Q8N6Y1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH20Q8N6Y1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH20Q8N6Y1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH20Q8N6Y1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH20Q8N6Y1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDH20Q8N6Y1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH20Q8N6Y1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDH20Q8N6Y1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDH20Q8N6Y1 AL137060.1-201ENST00000618151 2648 ntBASIC21.49■■□□□ 1.03
PCDH20Q8N6Y1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH20Q8N6Y1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH20Q8N6Y1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH20Q8N6Y1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH20Q8N6Y1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.49■■□□□ 1.03
PCDH20Q8N6Y1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDH20Q8N6Y1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.49■■□□□ 1.03
PCDH20Q8N6Y1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDH20Q8N6Y1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH20Q8N6Y1 BID-214ENST00000617586 542 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDH20Q8N6Y1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH20Q8N6Y1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH20Q8N6Y1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH20Q8N6Y1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDH20Q8N6Y1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH20Q8N6Y1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH20Q8N6Y1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
PCDH20Q8N6Y1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
PCDH20Q8N6Y1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH20Q8N6Y1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH20Q8N6Y1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
PCDH20Q8N6Y1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH20Q8N6Y1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH20Q8N6Y1 RARRES2P11-201ENST00000635158 484 ntBASIC21.48■■□□□ 1.03
PCDH20Q8N6Y1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH20Q8N6Y1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH20Q8N6Y1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH20Q8N6Y1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH20Q8N6Y1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH20Q8N6Y1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.47■■□□□ 1.03
PCDH20Q8N6Y1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDH20Q8N6Y1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH20Q8N6Y1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH20Q8N6Y1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH20Q8N6Y1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.47■■□□□ 1.03
PCDH20Q8N6Y1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDH20Q8N6Y1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDH20Q8N6Y1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH20Q8N6Y1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms