Protein–RNA interactions for Protein: Q8N187

CARF, Calcium-responsive transcription factor, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARFQ8N187 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CARFQ8N187 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CARFQ8N187 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CARFQ8N187 AC233723.2-201ENST00000623798 2106 ntBASIC20.08■□□□□ 0.81
CARFQ8N187 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CARFQ8N187 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CARFQ8N187 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CARFQ8N187 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CARFQ8N187 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CARFQ8N187 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CARFQ8N187 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CARFQ8N187 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CARFQ8N187 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CARFQ8N187 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CARFQ8N187 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CARFQ8N187 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
CARFQ8N187 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.08■□□□□ 0.8
CARFQ8N187 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CARFQ8N187 AC068473.5-201ENST00000616428 2072 ntBASIC20.07■□□□□ 0.8
CARFQ8N187 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CARFQ8N187 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CARFQ8N187 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CARFQ8N187 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CARFQ8N187 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CARFQ8N187 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.07■□□□□ 0.8
CARFQ8N187 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CARFQ8N187 GUSBP6-202ENST00000438529 1198 ntBASIC20.07■□□□□ 0.8
CARFQ8N187 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CARFQ8N187 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.07■□□□□ 0.8
CARFQ8N187 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
CARFQ8N187 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CARFQ8N187 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CARFQ8N187 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CARFQ8N187 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CARFQ8N187 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CARFQ8N187 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CARFQ8N187 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CARFQ8N187 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CARFQ8N187 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.06■□□□□ 0.8
CARFQ8N187 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CARFQ8N187 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CARFQ8N187 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CARFQ8N187 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.06■□□□□ 0.8
CARFQ8N187 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CARFQ8N187 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CARFQ8N187 AC073210.2-201ENST00000430369 194 ntBASIC20.06■□□□□ 0.8
CARFQ8N187 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CARFQ8N187 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CARFQ8N187 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CARFQ8N187 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CARFQ8N187 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.06■□□□□ 0.8
CARFQ8N187 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.06■□□□□ 0.8
CARFQ8N187 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.06■□□□□ 0.8
CARFQ8N187 AC105036.2-201ENST00000569468 176 ntBASIC20.06■□□□□ 0.8
CARFQ8N187 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.06■□□□□ 0.8
CARFQ8N187 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.06■□□□□ 0.8
CARFQ8N187 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CARFQ8N187 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.06■□□□□ 0.8
CARFQ8N187 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.05■□□□□ 0.8
CARFQ8N187 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CARFQ8N187 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CARFQ8N187 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.05■□□□□ 0.8
CARFQ8N187 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CARFQ8N187 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CARFQ8N187 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.05■□□□□ 0.8
CARFQ8N187 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.05■□□□□ 0.8
CARFQ8N187 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CARFQ8N187 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CARFQ8N187 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.05■□□□□ 0.8
CARFQ8N187 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.05■□□□□ 0.8
CARFQ8N187 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CARFQ8N187 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.05■□□□□ 0.8
CARFQ8N187 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CARFQ8N187 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CARFQ8N187 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CARFQ8N187 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CARFQ8N187 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CARFQ8N187 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.04■□□□□ 0.8
CARFQ8N187 AL355802.2-201ENST00000402069 882 ntBASIC20.04■□□□□ 0.8
CARFQ8N187 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.04■□□□□ 0.8
CARFQ8N187 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.04■□□□□ 0.8
CARFQ8N187 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CARFQ8N187 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CARFQ8N187 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CARFQ8N187 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CARFQ8N187 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CARFQ8N187 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CARFQ8N187 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CARFQ8N187 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CARFQ8N187 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CARFQ8N187 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CARFQ8N187 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CARFQ8N187 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CARFQ8N187 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CARFQ8N187 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CARFQ8N187 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.03■□□□□ 0.8
CARFQ8N187 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CARFQ8N187 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CARFQ8N187 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.03■□□□□ 0.8
CARFQ8N187 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms