Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SMC5Q8IY18 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC26.18■■□□□ 1.78
SMC5Q8IY18 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SMC5Q8IY18 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SMC5Q8IY18 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC26.18■■□□□ 1.78
SMC5Q8IY18 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
SMC5Q8IY18 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
SMC5Q8IY18 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SMC5Q8IY18 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC26.17■■□□□ 1.78
SMC5Q8IY18 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC26.17■■□□□ 1.78
SMC5Q8IY18 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SMC5Q8IY18 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC26.17■■□□□ 1.78
SMC5Q8IY18 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SMC5Q8IY18 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SMC5Q8IY18 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC26.16■■□□□ 1.78
SMC5Q8IY18 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC26.16■■□□□ 1.78
SMC5Q8IY18 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SMC5Q8IY18 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
SMC5Q8IY18 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SMC5Q8IY18 FXN-202ENST00000396364 980 ntTSL 5 BASIC26.16■■□□□ 1.78
SMC5Q8IY18 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC26.16■■□□□ 1.78
SMC5Q8IY18 RNF146-206ENST00000480444 843 ntTSL 2 BASIC26.16■■□□□ 1.78
SMC5Q8IY18 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC26.16■■□□□ 1.78
SMC5Q8IY18 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC26.16■■□□□ 1.78
SMC5Q8IY18 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SMC5Q8IY18 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SMC5Q8IY18 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
SMC5Q8IY18 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SMC5Q8IY18 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.15■■□□□ 1.78
SMC5Q8IY18 RARG-204ENST00000543726 1779 ntTSL 2 BASIC26.15■■□□□ 1.78
SMC5Q8IY18 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
SMC5Q8IY18 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC26.15■■□□□ 1.78
SMC5Q8IY18 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
SMC5Q8IY18 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC26.15■■□□□ 1.78
SMC5Q8IY18 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SMC5Q8IY18 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SMC5Q8IY18 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SMC5Q8IY18 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC26.15■■□□□ 1.78
SMC5Q8IY18 EEF1DP3-203ENST00000566025 782 ntBASIC26.15■■□□□ 1.78
SMC5Q8IY18 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.15■■□□□ 1.78
SMC5Q8IY18 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.15■■□□□ 1.78
SMC5Q8IY18 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC26.15■■□□□ 1.78
SMC5Q8IY18 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SMC5Q8IY18 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SMC5Q8IY18 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SMC5Q8IY18 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC26.15■■□□□ 1.78
SMC5Q8IY18 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC26.15■■□□□ 1.78
SMC5Q8IY18 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC26.15■■□□□ 1.78
SMC5Q8IY18 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SMC5Q8IY18 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
SMC5Q8IY18 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SMC5Q8IY18 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SMC5Q8IY18 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SMC5Q8IY18 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SMC5Q8IY18 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC26.14■■□□□ 1.78
SMC5Q8IY18 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
SMC5Q8IY18 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
SMC5Q8IY18 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC26.14■■□□□ 1.77
SMC5Q8IY18 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
SMC5Q8IY18 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC26.13■■□□□ 1.77
SMC5Q8IY18 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC26.13■■□□□ 1.77
SMC5Q8IY18 AL354811.1-201ENST00000610286 706 ntBASIC26.13■■□□□ 1.77
SMC5Q8IY18 CPT2-209ENST00000636935 803 ntTSL 5 BASIC26.13■■□□□ 1.77
SMC5Q8IY18 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SMC5Q8IY18 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SMC5Q8IY18 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC26.13■■□□□ 1.77
SMC5Q8IY18 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC26.13■■□□□ 1.77
SMC5Q8IY18 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SMC5Q8IY18 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SMC5Q8IY18 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
SMC5Q8IY18 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SMC5Q8IY18 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SMC5Q8IY18 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SMC5Q8IY18 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SMC5Q8IY18 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SMC5Q8IY18 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
SMC5Q8IY18 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
SMC5Q8IY18 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
SMC5Q8IY18 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SMC5Q8IY18 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SMC5Q8IY18 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.12■■□□□ 1.77
SMC5Q8IY18 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC26.12■■□□□ 1.77
SMC5Q8IY18 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC26.12■■□□□ 1.77
SMC5Q8IY18 RHOF-204ENST00000537265 699 ntTSL 2 BASIC26.12■■□□□ 1.77
SMC5Q8IY18 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC26.12■■□□□ 1.77
SMC5Q8IY18 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SMC5Q8IY18 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC26.12■■□□□ 1.77
SMC5Q8IY18 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SMC5Q8IY18 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC26.12■■□□□ 1.77
SMC5Q8IY18 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SMC5Q8IY18 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SMC5Q8IY18 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC26.12■■□□□ 1.77
SMC5Q8IY18 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SMC5Q8IY18 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SMC5Q8IY18 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC26.11■■□□□ 1.77
SMC5Q8IY18 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
SMC5Q8IY18 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC26.11■■□□□ 1.77
SMC5Q8IY18 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC26.11■■□□□ 1.77
SMC5Q8IY18 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SMC5Q8IY18 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms