Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC30.46■■■□□ 2.47
UBR1Q8IWV7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
UBR1Q8IWV7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
UBR1Q8IWV7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC30.46■■■□□ 2.47
UBR1Q8IWV7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
UBR1Q8IWV7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC30.45■■■□□ 2.47
UBR1Q8IWV7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
UBR1Q8IWV7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
UBR1Q8IWV7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC30.45■■■□□ 2.47
UBR1Q8IWV7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.46
UBR1Q8IWV7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
UBR1Q8IWV7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
UBR1Q8IWV7 FAM21FP-204ENST00000608637 956 ntBASIC30.44■■■□□ 2.46
UBR1Q8IWV7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
UBR1Q8IWV7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
UBR1Q8IWV7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
UBR1Q8IWV7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
UBR1Q8IWV7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
UBR1Q8IWV7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC30.44■■■□□ 2.46
UBR1Q8IWV7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
UBR1Q8IWV7 AC091799.1-201ENST00000422823 811 ntBASIC30.44■■■□□ 2.46
UBR1Q8IWV7 LINC01023-201ENST00000606054 436 ntBASIC30.44■■■□□ 2.46
UBR1Q8IWV7 AC010331.1-201ENST00000611423 582 ntBASIC30.44■■■□□ 2.46
UBR1Q8IWV7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
UBR1Q8IWV7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
UBR1Q8IWV7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC30.43■■■□□ 2.46
UBR1Q8IWV7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
UBR1Q8IWV7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
UBR1Q8IWV7 MIR1224-201ENST00000408193 85 ntBASIC30.43■■■□□ 2.46
UBR1Q8IWV7 FAM210CP-201ENST00000445714 574 ntBASIC30.43■■■□□ 2.46
UBR1Q8IWV7 MAX-217ENST00000557277 728 ntTSL 3 BASIC30.43■■■□□ 2.46
UBR1Q8IWV7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
UBR1Q8IWV7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
UBR1Q8IWV7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC30.42■■■□□ 2.46
UBR1Q8IWV7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
UBR1Q8IWV7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC30.42■■■□□ 2.46
UBR1Q8IWV7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC30.42■■■□□ 2.46
UBR1Q8IWV7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC30.42■■■□□ 2.46
UBR1Q8IWV7 AC012618.2-201ENST00000428058 849 ntBASIC30.42■■■□□ 2.46
UBR1Q8IWV7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
UBR1Q8IWV7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
UBR1Q8IWV7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
UBR1Q8IWV7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
UBR1Q8IWV7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
UBR1Q8IWV7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC30.41■■■□□ 2.46
UBR1Q8IWV7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC30.41■■■□□ 2.46
UBR1Q8IWV7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
UBR1Q8IWV7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC30.41■■■□□ 2.46
UBR1Q8IWV7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC30.41■■■□□ 2.46
UBR1Q8IWV7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
UBR1Q8IWV7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
UBR1Q8IWV7 SLC29A4P2-201ENST00000504749 1089 ntBASIC30.4■■■□□ 2.46
UBR1Q8IWV7 Z99916.2-201ENST00000604037 246 ntBASIC30.4■■■□□ 2.46
UBR1Q8IWV7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
UBR1Q8IWV7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
UBR1Q8IWV7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC30.4■■■□□ 2.46
UBR1Q8IWV7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC30.4■■■□□ 2.46
UBR1Q8IWV7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
UBR1Q8IWV7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC30.39■■■□□ 2.46
UBR1Q8IWV7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
UBR1Q8IWV7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC30.39■■■□□ 2.46
UBR1Q8IWV7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
UBR1Q8IWV7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
UBR1Q8IWV7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC30.39■■■□□ 2.46
UBR1Q8IWV7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC30.39■■■□□ 2.46
UBR1Q8IWV7 AC100791.3-201ENST00000617619 330 ntBASIC30.39■■■□□ 2.46
UBR1Q8IWV7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC30.39■■■□□ 2.46
UBR1Q8IWV7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC30.39■■■□□ 2.46
UBR1Q8IWV7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
UBR1Q8IWV7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
UBR1Q8IWV7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC30.39■■■□□ 2.45
UBR1Q8IWV7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
UBR1Q8IWV7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
UBR1Q8IWV7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC30.38■■■□□ 2.45
UBR1Q8IWV7 AC092368.3-202ENST00000574180 1591 ntBASIC30.38■■■□□ 2.45
UBR1Q8IWV7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
UBR1Q8IWV7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC30.38■■■□□ 2.45
UBR1Q8IWV7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
UBR1Q8IWV7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC30.37■■■□□ 2.45
UBR1Q8IWV7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC30.37■■■□□ 2.45
UBR1Q8IWV7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
UBR1Q8IWV7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC30.37■■■□□ 2.45
UBR1Q8IWV7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC30.37■■■□□ 2.45
UBR1Q8IWV7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
UBR1Q8IWV7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
UBR1Q8IWV7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
UBR1Q8IWV7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
UBR1Q8IWV7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
UBR1Q8IWV7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC30.36■■■□□ 2.45
UBR1Q8IWV7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
UBR1Q8IWV7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
UBR1Q8IWV7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
UBR1Q8IWV7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
UBR1Q8IWV7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
UBR1Q8IWV7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC30.35■■■□□ 2.45
UBR1Q8IWV7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
UBR1Q8IWV7 SOX15-203ENST00000570788 1093 ntBASIC30.35■■■□□ 2.45
UBR1Q8IWV7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
UBR1Q8IWV7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
UBR1Q8IWV7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC30.35■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms