Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL23A1Q86Y22 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL23A1Q86Y22 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC26.82■■□□□ 1.88
COL23A1Q86Y22 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
COL23A1Q86Y22 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC26.81■■□□□ 1.88
COL23A1Q86Y22 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL23A1Q86Y22 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
COL23A1Q86Y22 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
COL23A1Q86Y22 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.81■■□□□ 1.88
COL23A1Q86Y22 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL23A1Q86Y22 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC26.81■■□□□ 1.88
COL23A1Q86Y22 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
COL23A1Q86Y22 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC26.81■■□□□ 1.88
COL23A1Q86Y22 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
COL23A1Q86Y22 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL23A1Q86Y22 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
COL23A1Q86Y22 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.8■■□□□ 1.88
COL23A1Q86Y22 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
COL23A1Q86Y22 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
COL23A1Q86Y22 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
COL23A1Q86Y22 MDFI-202ENST00000373050 809 ntTSL 2 BASIC26.8■■□□□ 1.88
COL23A1Q86Y22 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC26.8■■□□□ 1.88
COL23A1Q86Y22 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.8■■□□□ 1.88
COL23A1Q86Y22 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
COL23A1Q86Y22 AC061975.6-201ENST00000579045 1553 ntBASIC26.8■■□□□ 1.88
COL23A1Q86Y22 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL23A1Q86Y22 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC26.79■■□□□ 1.88
COL23A1Q86Y22 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL23A1Q86Y22 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC26.79■■□□□ 1.88
COL23A1Q86Y22 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL23A1Q86Y22 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.79■■□□□ 1.88
COL23A1Q86Y22 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
COL23A1Q86Y22 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.78■■□□□ 1.88
COL23A1Q86Y22 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
COL23A1Q86Y22 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
COL23A1Q86Y22 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
COL23A1Q86Y22 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC26.78■■□□□ 1.88
COL23A1Q86Y22 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC26.78■■□□□ 1.88
COL23A1Q86Y22 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC26.78■■□□□ 1.88
COL23A1Q86Y22 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
COL23A1Q86Y22 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
COL23A1Q86Y22 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
COL23A1Q86Y22 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC26.77■■□□□ 1.88
COL23A1Q86Y22 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC26.77■■□□□ 1.88
COL23A1Q86Y22 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC26.77■■□□□ 1.88
COL23A1Q86Y22 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
COL23A1Q86Y22 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
COL23A1Q86Y22 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC26.77■■□□□ 1.88
COL23A1Q86Y22 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
COL23A1Q86Y22 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
COL23A1Q86Y22 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
COL23A1Q86Y22 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
COL23A1Q86Y22 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC26.76■■□□□ 1.87
COL23A1Q86Y22 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC26.76■■□□□ 1.87
COL23A1Q86Y22 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC26.76■■□□□ 1.87
COL23A1Q86Y22 AC069544.1-201ENST00000609399 999 ntBASIC26.76■■□□□ 1.87
COL23A1Q86Y22 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
COL23A1Q86Y22 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC26.76■■□□□ 1.87
COL23A1Q86Y22 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
COL23A1Q86Y22 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
COL23A1Q86Y22 AC092368.3-202ENST00000574180 1591 ntBASIC26.75■■□□□ 1.87
COL23A1Q86Y22 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.75■■□□□ 1.87
COL23A1Q86Y22 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
COL23A1Q86Y22 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC26.75■■□□□ 1.87
COL23A1Q86Y22 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC26.75■■□□□ 1.87
COL23A1Q86Y22 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC26.75■■□□□ 1.87
COL23A1Q86Y22 ABHD17AP6-201ENST00000458502 1044 ntBASIC26.75■■□□□ 1.87
COL23A1Q86Y22 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
COL23A1Q86Y22 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC26.75■■□□□ 1.87
COL23A1Q86Y22 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC26.75■■□□□ 1.87
COL23A1Q86Y22 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC26.75■■□□□ 1.87
COL23A1Q86Y22 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
COL23A1Q86Y22 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
COL23A1Q86Y22 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
COL23A1Q86Y22 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
COL23A1Q86Y22 SLC29A4P2-201ENST00000504749 1089 ntBASIC26.74■■□□□ 1.87
COL23A1Q86Y22 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
COL23A1Q86Y22 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
COL23A1Q86Y22 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC26.74■■□□□ 1.87
COL23A1Q86Y22 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
COL23A1Q86Y22 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
COL23A1Q86Y22 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
COL23A1Q86Y22 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
COL23A1Q86Y22 TSPY7P-201ENST00000431358 1114 ntBASIC26.73■■□□□ 1.87
COL23A1Q86Y22 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
COL23A1Q86Y22 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC26.73■■□□□ 1.87
COL23A1Q86Y22 REXO2-216ENST00000544196 452 ntTSL 3 BASIC26.73■■□□□ 1.87
COL23A1Q86Y22 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC26.73■■□□□ 1.87
COL23A1Q86Y22 FAM21FP-204ENST00000608637 956 ntBASIC26.73■■□□□ 1.87
COL23A1Q86Y22 AC100791.3-201ENST00000617619 330 ntBASIC26.73■■□□□ 1.87
COL23A1Q86Y22 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
COL23A1Q86Y22 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC26.73■■□□□ 1.87
COL23A1Q86Y22 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
COL23A1Q86Y22 RARG-204ENST00000543726 1779 ntTSL 2 BASIC26.73■■□□□ 1.87
COL23A1Q86Y22 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.73■■□□□ 1.87
COL23A1Q86Y22 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.73■■□□□ 1.87
COL23A1Q86Y22 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
COL23A1Q86Y22 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
COL23A1Q86Y22 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
COL23A1Q86Y22 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms