Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.97■□□□□ 0.95
ZC3HC1Q86WB0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.97■□□□□ 0.95
ZC3HC1Q86WB0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZC3HC1Q86WB0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZC3HC1Q86WB0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
ZC3HC1Q86WB0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ZC3HC1Q86WB0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZC3HC1Q86WB0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
ZC3HC1Q86WB0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZC3HC1Q86WB0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.97■□□□□ 0.95
ZC3HC1Q86WB0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.97■□□□□ 0.95
ZC3HC1Q86WB0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.96■□□□□ 0.95
ZC3HC1Q86WB0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZC3HC1Q86WB0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZC3HC1Q86WB0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ZC3HC1Q86WB0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZC3HC1Q86WB0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZC3HC1Q86WB0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZC3HC1Q86WB0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZC3HC1Q86WB0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ZC3HC1Q86WB0 MIR939-201ENST00000401314 82 ntBASIC20.96■□□□□ 0.95
ZC3HC1Q86WB0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.96■□□□□ 0.95
ZC3HC1Q86WB0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ZC3HC1Q86WB0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.96■□□□□ 0.95
ZC3HC1Q86WB0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZC3HC1Q86WB0 AL355001.2-201ENST00000620617 1191 ntBASIC20.96■□□□□ 0.95
ZC3HC1Q86WB0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZC3HC1Q86WB0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ZC3HC1Q86WB0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ZC3HC1Q86WB0 RASA4CP-201ENST00000424092 1398 ntBASIC20.96■□□□□ 0.95
ZC3HC1Q86WB0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.95■□□□□ 0.95
ZC3HC1Q86WB0 BX005040.4-201ENST00000637145 1518 ntBASIC20.95■□□□□ 0.94
ZC3HC1Q86WB0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.95■□□□□ 0.94
ZC3HC1Q86WB0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.95■□□□□ 0.94
ZC3HC1Q86WB0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
ZC3HC1Q86WB0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.95■□□□□ 0.94
ZC3HC1Q86WB0 MIR572-201ENST00000384983 95 ntBASIC20.95■□□□□ 0.94
ZC3HC1Q86WB0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZC3HC1Q86WB0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.95■□□□□ 0.94
ZC3HC1Q86WB0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.95■□□□□ 0.94
ZC3HC1Q86WB0 AF213884.3-201ENST00000563833 479 ntBASIC20.95■□□□□ 0.94
ZC3HC1Q86WB0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.95■□□□□ 0.94
ZC3HC1Q86WB0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.95■□□□□ 0.94
ZC3HC1Q86WB0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZC3HC1Q86WB0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZC3HC1Q86WB0 AL157384.1-201ENST00000445995 2473 ntBASIC20.95■□□□□ 0.94
ZC3HC1Q86WB0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZC3HC1Q86WB0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
ZC3HC1Q86WB0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
ZC3HC1Q86WB0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.94■□□□□ 0.94
ZC3HC1Q86WB0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.94■□□□□ 0.94
ZC3HC1Q86WB0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZC3HC1Q86WB0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZC3HC1Q86WB0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
ZC3HC1Q86WB0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZC3HC1Q86WB0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZC3HC1Q86WB0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZC3HC1Q86WB0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZC3HC1Q86WB0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZC3HC1Q86WB0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZC3HC1Q86WB0 AL031432.3-201ENST00000607698 485 ntBASIC20.94■□□□□ 0.94
ZC3HC1Q86WB0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZC3HC1Q86WB0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZC3HC1Q86WB0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZC3HC1Q86WB0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.94■□□□□ 0.94
ZC3HC1Q86WB0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZC3HC1Q86WB0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.94■□□□□ 0.94
ZC3HC1Q86WB0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZC3HC1Q86WB0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ZC3HC1Q86WB0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZC3HC1Q86WB0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZC3HC1Q86WB0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZC3HC1Q86WB0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZC3HC1Q86WB0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.93■□□□□ 0.94
ZC3HC1Q86WB0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.93■□□□□ 0.94
ZC3HC1Q86WB0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
ZC3HC1Q86WB0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZC3HC1Q86WB0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.93■□□□□ 0.94
ZC3HC1Q86WB0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.92■□□□□ 0.94
ZC3HC1Q86WB0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZC3HC1Q86WB0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.92■□□□□ 0.94
ZC3HC1Q86WB0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZC3HC1Q86WB0 AC091305.1-201ENST00000479476 895 ntBASIC20.92■□□□□ 0.94
ZC3HC1Q86WB0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZC3HC1Q86WB0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZC3HC1Q86WB0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZC3HC1Q86WB0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZC3HC1Q86WB0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.92■□□□□ 0.94
ZC3HC1Q86WB0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ZC3HC1Q86WB0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZC3HC1Q86WB0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZC3HC1Q86WB0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZC3HC1Q86WB0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZC3HC1Q86WB0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZC3HC1Q86WB0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZC3HC1Q86WB0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ZC3HC1Q86WB0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ZC3HC1Q86WB0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZC3HC1Q86WB0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.91■□□□□ 0.94
ZC3HC1Q86WB0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms