Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC31.79■■■□□ 2.68
CCDC141Q6ZP82 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
CCDC141Q6ZP82 FAM21FP-204ENST00000608637 956 ntBASIC31.79■■■□□ 2.68
CCDC141Q6ZP82 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CCDC141Q6ZP82 KRT17P1-201ENST00000399211 1546 ntBASIC31.79■■■□□ 2.68
CCDC141Q6ZP82 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CCDC141Q6ZP82 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC31.79■■■□□ 2.68
CCDC141Q6ZP82 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC31.79■■■□□ 2.68
CCDC141Q6ZP82 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC31.79■■■□□ 2.68
CCDC141Q6ZP82 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CCDC141Q6ZP82 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC31.78■■■□□ 2.68
CCDC141Q6ZP82 OR2A1-AS1-201ENST00000462305 773 ntBASIC31.78■■■□□ 2.68
CCDC141Q6ZP82 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC31.78■■■□□ 2.68
CCDC141Q6ZP82 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC31.78■■■□□ 2.68
CCDC141Q6ZP82 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
CCDC141Q6ZP82 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC31.78■■■□□ 2.68
CCDC141Q6ZP82 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CCDC141Q6ZP82 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CCDC141Q6ZP82 LTK-203ENST00000453182 2412 ntTSL 2 BASIC31.78■■■□□ 2.68
CCDC141Q6ZP82 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
CCDC141Q6ZP82 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC31.78■■■□□ 2.68
CCDC141Q6ZP82 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CCDC141Q6ZP82 IRX5-204ENST00000560154 879 ntTSL 5 BASIC31.78■■■□□ 2.68
CCDC141Q6ZP82 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CCDC141Q6ZP82 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
CCDC141Q6ZP82 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CCDC141Q6ZP82 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
CCDC141Q6ZP82 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CCDC141Q6ZP82 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC31.77■■■□□ 2.68
CCDC141Q6ZP82 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
CCDC141Q6ZP82 MMAB-206ENST00000540016 945 ntTSL 3 BASIC31.77■■■□□ 2.68
CCDC141Q6ZP82 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC31.77■■■□□ 2.68
CCDC141Q6ZP82 AC006058.3-201ENST00000606217 1069 ntBASIC31.77■■■□□ 2.68
CCDC141Q6ZP82 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CCDC141Q6ZP82 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC31.77■■■□□ 2.68
CCDC141Q6ZP82 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC31.76■■■□□ 2.68
CCDC141Q6ZP82 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
CCDC141Q6ZP82 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
CCDC141Q6ZP82 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC31.76■■■□□ 2.68
CCDC141Q6ZP82 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC31.76■■■□□ 2.68
CCDC141Q6ZP82 AP003097.1-201ENST00000530657 1135 ntBASIC31.76■■■□□ 2.67
CCDC141Q6ZP82 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.67
CCDC141Q6ZP82 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC31.76■■■□□ 2.67
CCDC141Q6ZP82 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
CCDC141Q6ZP82 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC141Q6ZP82 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
CCDC141Q6ZP82 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC31.75■■■□□ 2.67
CCDC141Q6ZP82 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC141Q6ZP82 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC141Q6ZP82 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
CCDC141Q6ZP82 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC31.75■■■□□ 2.67
CCDC141Q6ZP82 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC141Q6ZP82 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC141Q6ZP82 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CCDC141Q6ZP82 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CCDC141Q6ZP82 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC31.74■■■□□ 2.67
CCDC141Q6ZP82 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC31.74■■■□□ 2.67
CCDC141Q6ZP82 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC31.74■■■□□ 2.67
CCDC141Q6ZP82 CASP6-205ENST00000505486 538 ntTSL 4 BASIC31.74■■■□□ 2.67
CCDC141Q6ZP82 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC31.74■■■□□ 2.67
CCDC141Q6ZP82 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC31.74■■■□□ 2.67
CCDC141Q6ZP82 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC31.73■■■□□ 2.67
CCDC141Q6ZP82 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC31.73■■■□□ 2.67
CCDC141Q6ZP82 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CCDC141Q6ZP82 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CCDC141Q6ZP82 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CCDC141Q6ZP82 AC026366.1-201ENST00000488803 879 ntBASIC31.73■■■□□ 2.67
CCDC141Q6ZP82 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC31.73■■■□□ 2.67
CCDC141Q6ZP82 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CCDC141Q6ZP82 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CCDC141Q6ZP82 AC128676.1-201ENST00000454392 318 ntBASIC31.72■■■□□ 2.67
CCDC141Q6ZP82 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC31.72■■■□□ 2.67
CCDC141Q6ZP82 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CCDC141Q6ZP82 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC31.72■■■□□ 2.67
CCDC141Q6ZP82 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
CCDC141Q6ZP82 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
CCDC141Q6ZP82 CYP2T3P-201ENST00000601990 817 ntBASIC31.72■■■□□ 2.67
CCDC141Q6ZP82 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC31.71■■■□□ 2.67
CCDC141Q6ZP82 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
CCDC141Q6ZP82 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CCDC141Q6ZP82 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC31.71■■■□□ 2.67
CCDC141Q6ZP82 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC31.71■■■□□ 2.67
CCDC141Q6ZP82 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC31.71■■■□□ 2.67
CCDC141Q6ZP82 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC31.71■■■□□ 2.67
CCDC141Q6ZP82 AL355472.2-201ENST00000422958 438 ntBASIC31.71■■■□□ 2.67
CCDC141Q6ZP82 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC31.71■■■□□ 2.67
CCDC141Q6ZP82 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC31.71■■■□□ 2.67
CCDC141Q6ZP82 MMD2-204ENST00000612910 778 ntTSL 5 BASIC31.71■■■□□ 2.67
CCDC141Q6ZP82 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC31.71■■■□□ 2.67
CCDC141Q6ZP82 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC31.7■■■□□ 2.67
CCDC141Q6ZP82 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
CCDC141Q6ZP82 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.67
CCDC141Q6ZP82 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
CCDC141Q6ZP82 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC31.7■■■□□ 2.66
CCDC141Q6ZP82 AC100791.3-201ENST00000617619 330 ntBASIC31.7■■■□□ 2.66
CCDC141Q6ZP82 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.66
CCDC141Q6ZP82 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC31.7■■■□□ 2.66
CCDC141Q6ZP82 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
CCDC141Q6ZP82 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
CCDC141Q6ZP82 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms