Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
DCLRE1AQ6PJP8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
DCLRE1AQ6PJP8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
DCLRE1AQ6PJP8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
DCLRE1AQ6PJP8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.6■■□□□ 1.21
DCLRE1AQ6PJP8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
DCLRE1AQ6PJP8 CD99P1-205ENST00000527459 561 ntBASIC22.6■■□□□ 1.21
DCLRE1AQ6PJP8 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
DCLRE1AQ6PJP8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
DCLRE1AQ6PJP8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.6■■□□□ 1.21
DCLRE1AQ6PJP8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.59■■□□□ 1.21
DCLRE1AQ6PJP8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
DCLRE1AQ6PJP8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
DCLRE1AQ6PJP8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.59■■□□□ 1.21
DCLRE1AQ6PJP8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
DCLRE1AQ6PJP8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
DCLRE1AQ6PJP8 SLC29A4P1-201ENST00000398760 971 ntBASIC22.59■■□□□ 1.21
DCLRE1AQ6PJP8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
DCLRE1AQ6PJP8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.59■■□□□ 1.21
DCLRE1AQ6PJP8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
DCLRE1AQ6PJP8 AC105036.2-201ENST00000569468 176 ntBASIC22.59■■□□□ 1.21
DCLRE1AQ6PJP8 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
DCLRE1AQ6PJP8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.59■■□□□ 1.21
DCLRE1AQ6PJP8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
DCLRE1AQ6PJP8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
DCLRE1AQ6PJP8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
DCLRE1AQ6PJP8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
DCLRE1AQ6PJP8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.58■■□□□ 1.21
DCLRE1AQ6PJP8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
DCLRE1AQ6PJP8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.58■■□□□ 1.21
DCLRE1AQ6PJP8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.58■■□□□ 1.21
DCLRE1AQ6PJP8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.58■■□□□ 1.21
DCLRE1AQ6PJP8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC22.58■■□□□ 1.21
DCLRE1AQ6PJP8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.58■■□□□ 1.21
DCLRE1AQ6PJP8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
DCLRE1AQ6PJP8 RBM17P2-201ENST00000616397 1405 ntBASIC22.57■■□□□ 1.2
DCLRE1AQ6PJP8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
DCLRE1AQ6PJP8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
DCLRE1AQ6PJP8 AC233723.2-201ENST00000623798 2106 ntBASIC22.57■■□□□ 1.2
DCLRE1AQ6PJP8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
DCLRE1AQ6PJP8 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
DCLRE1AQ6PJP8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
DCLRE1AQ6PJP8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.57■■□□□ 1.2
DCLRE1AQ6PJP8 AC243732.1-201ENST00000612648 864 ntBASIC22.57■■□□□ 1.2
DCLRE1AQ6PJP8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.57■■□□□ 1.2
DCLRE1AQ6PJP8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.57■■□□□ 1.2
DCLRE1AQ6PJP8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
DCLRE1AQ6PJP8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
DCLRE1AQ6PJP8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
DCLRE1AQ6PJP8 FAM99A-202ENST00000538190 1989 ntBASIC22.56■■□□□ 1.2
DCLRE1AQ6PJP8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
DCLRE1AQ6PJP8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
DCLRE1AQ6PJP8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
DCLRE1AQ6PJP8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.56■■□□□ 1.2
DCLRE1AQ6PJP8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
DCLRE1AQ6PJP8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
DCLRE1AQ6PJP8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
DCLRE1AQ6PJP8 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.56■■□□□ 1.2
DCLRE1AQ6PJP8 OR10C1-204ENST00000622521 1039 ntBASIC22.56■■□□□ 1.2
DCLRE1AQ6PJP8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.56■■□□□ 1.2
DCLRE1AQ6PJP8 AC010542.4-201ENST00000563151 1910 ntBASIC22.56■■□□□ 1.2
DCLRE1AQ6PJP8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
DCLRE1AQ6PJP8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
DCLRE1AQ6PJP8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
DCLRE1AQ6PJP8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
DCLRE1AQ6PJP8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
DCLRE1AQ6PJP8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.55■■□□□ 1.2
DCLRE1AQ6PJP8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.55■■□□□ 1.2
DCLRE1AQ6PJP8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
DCLRE1AQ6PJP8 CYP2T1P-201ENST00000432607 1285 ntBASIC22.55■■□□□ 1.2
DCLRE1AQ6PJP8 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.55■■□□□ 1.2
DCLRE1AQ6PJP8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
DCLRE1AQ6PJP8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.55■■□□□ 1.2
DCLRE1AQ6PJP8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.55■■□□□ 1.2
DCLRE1AQ6PJP8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
DCLRE1AQ6PJP8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.55■■□□□ 1.2
DCLRE1AQ6PJP8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.55■■□□□ 1.2
DCLRE1AQ6PJP8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.55■■□□□ 1.2
DCLRE1AQ6PJP8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.55■■□□□ 1.2
DCLRE1AQ6PJP8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
DCLRE1AQ6PJP8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
DCLRE1AQ6PJP8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
DCLRE1AQ6PJP8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
DCLRE1AQ6PJP8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
DCLRE1AQ6PJP8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
DCLRE1AQ6PJP8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.54■■□□□ 1.2
DCLRE1AQ6PJP8 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.54■■□□□ 1.2
DCLRE1AQ6PJP8 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.54■■□□□ 1.2
DCLRE1AQ6PJP8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC22.54■■□□□ 1.2
DCLRE1AQ6PJP8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC22.54■■□□□ 1.2
DCLRE1AQ6PJP8 AL138781.1-201ENST00000566567 1274 ntBASIC22.54■■□□□ 1.2
DCLRE1AQ6PJP8 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.54■■□□□ 1.2
DCLRE1AQ6PJP8 AC066615.1-201ENST00000640911 628 ntBASIC22.54■■□□□ 1.2
DCLRE1AQ6PJP8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.54■■□□□ 1.2
DCLRE1AQ6PJP8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.54■■□□□ 1.2
DCLRE1AQ6PJP8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.54■■□□□ 1.2
DCLRE1AQ6PJP8 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
DCLRE1AQ6PJP8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
DCLRE1AQ6PJP8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
DCLRE1AQ6PJP8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms