Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC25.47■■□□□ 1.67
PDS5AQ29RF7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PDS5AQ29RF7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PDS5AQ29RF7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PDS5AQ29RF7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PDS5AQ29RF7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PDS5AQ29RF7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
PDS5AQ29RF7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
PDS5AQ29RF7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
PDS5AQ29RF7 AL512625.2-201ENST00000417533 625 ntBASIC25.46■■□□□ 1.67
PDS5AQ29RF7 AC073210.2-201ENST00000430369 194 ntBASIC25.46■■□□□ 1.67
PDS5AQ29RF7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC25.46■■□□□ 1.67
PDS5AQ29RF7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC25.46■■□□□ 1.67
PDS5AQ29RF7 AC105036.2-201ENST00000569468 176 ntBASIC25.46■■□□□ 1.67
PDS5AQ29RF7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
PDS5AQ29RF7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PDS5AQ29RF7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PDS5AQ29RF7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PDS5AQ29RF7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.46■■□□□ 1.67
PDS5AQ29RF7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC25.46■■□□□ 1.67
PDS5AQ29RF7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
PDS5AQ29RF7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
PDS5AQ29RF7 AC068473.5-201ENST00000616428 2072 ntBASIC25.45■■□□□ 1.67
PDS5AQ29RF7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
PDS5AQ29RF7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC25.45■■□□□ 1.67
PDS5AQ29RF7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
PDS5AQ29RF7 SLC29A4P1-201ENST00000398760 971 ntBASIC25.45■■□□□ 1.66
PDS5AQ29RF7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
PDS5AQ29RF7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
PDS5AQ29RF7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
PDS5AQ29RF7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PDS5AQ29RF7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
PDS5AQ29RF7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC25.45■■□□□ 1.66
PDS5AQ29RF7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PDS5AQ29RF7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PDS5AQ29RF7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PDS5AQ29RF7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC25.44■■□□□ 1.66
PDS5AQ29RF7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC25.44■■□□□ 1.66
PDS5AQ29RF7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC25.44■■□□□ 1.66
PDS5AQ29RF7 GUSBP5-202ENST00000510805 1989 ntBASIC25.44■■□□□ 1.66
PDS5AQ29RF7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
PDS5AQ29RF7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PDS5AQ29RF7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC25.44■■□□□ 1.66
PDS5AQ29RF7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
PDS5AQ29RF7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC25.43■■□□□ 1.66
PDS5AQ29RF7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC25.43■■□□□ 1.66
PDS5AQ29RF7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
PDS5AQ29RF7 AL591742.1-201ENST00000604433 565 ntBASIC25.43■■□□□ 1.66
PDS5AQ29RF7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC25.43■■□□□ 1.66
PDS5AQ29RF7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC25.43■■□□□ 1.66
PDS5AQ29RF7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.43■■□□□ 1.66
PDS5AQ29RF7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PDS5AQ29RF7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
PDS5AQ29RF7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC25.43■■□□□ 1.66
PDS5AQ29RF7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC25.43■■□□□ 1.66
PDS5AQ29RF7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC25.42■■□□□ 1.66
PDS5AQ29RF7 AL138781.1-201ENST00000566567 1274 ntBASIC25.42■■□□□ 1.66
PDS5AQ29RF7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC25.42■■□□□ 1.66
PDS5AQ29RF7 AC069236.1-201ENST00000604339 616 ntBASIC25.42■■□□□ 1.66
PDS5AQ29RF7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC25.42■■□□□ 1.66
PDS5AQ29RF7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC25.42■■□□□ 1.66
PDS5AQ29RF7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PDS5AQ29RF7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PDS5AQ29RF7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PDS5AQ29RF7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC25.42■■□□□ 1.66
PDS5AQ29RF7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PDS5AQ29RF7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC25.41■■□□□ 1.66
PDS5AQ29RF7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC25.41■■□□□ 1.66
PDS5AQ29RF7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC25.41■■□□□ 1.66
PDS5AQ29RF7 ECEL1P1-201ENST00000373592 1742 ntBASIC25.41■■□□□ 1.66
PDS5AQ29RF7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PDS5AQ29RF7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC25.41■■□□□ 1.66
PDS5AQ29RF7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC25.41■■□□□ 1.66
PDS5AQ29RF7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PDS5AQ29RF7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PDS5AQ29RF7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC25.4■■□□□ 1.66
PDS5AQ29RF7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PDS5AQ29RF7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PDS5AQ29RF7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC25.4■■□□□ 1.66
PDS5AQ29RF7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC25.4■■□□□ 1.66
PDS5AQ29RF7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC25.4■■□□□ 1.66
PDS5AQ29RF7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.4■■□□□ 1.66
PDS5AQ29RF7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC25.4■■□□□ 1.66
PDS5AQ29RF7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.4■■□□□ 1.66
PDS5AQ29RF7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.66
PDS5AQ29RF7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PDS5AQ29RF7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PDS5AQ29RF7 AC069152.1-201ENST00000438030 544 ntBASIC25.39■■□□□ 1.66
PDS5AQ29RF7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PDS5AQ29RF7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC25.39■■□□□ 1.66
PDS5AQ29RF7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
PDS5AQ29RF7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.66
PDS5AQ29RF7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PDS5AQ29RF7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PDS5AQ29RF7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
PDS5AQ29RF7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
PDS5AQ29RF7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC25.39■■□□□ 1.65
PDS5AQ29RF7 AC233723.2-201ENST00000623798 2106 ntBASIC25.39■■□□□ 1.65
PDS5AQ29RF7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC25.38■■□□□ 1.65
PDS5AQ29RF7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC25.38■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms