Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CFHR3Q02985 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CFHR3Q02985 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CFHR3Q02985 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.5■□□□□ 0.23
CFHR3Q02985 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CFHR3Q02985 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CFHR3Q02985 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.5■□□□□ 0.23
CFHR3Q02985 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CFHR3Q02985 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CFHR3Q02985 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CFHR3Q02985 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CFHR3Q02985 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CFHR3Q02985 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CFHR3Q02985 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CFHR3Q02985 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CFHR3Q02985 EP400NL-214ENST00000641289 2402 ntBASIC16.49■□□□□ 0.23
CFHR3Q02985 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.49■□□□□ 0.23
CFHR3Q02985 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
CFHR3Q02985 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CFHR3Q02985 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CFHR3Q02985 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CFHR3Q02985 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CFHR3Q02985 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CFHR3Q02985 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.49■□□□□ 0.23
CFHR3Q02985 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.49■□□□□ 0.23
CFHR3Q02985 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.49■□□□□ 0.23
CFHR3Q02985 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CFHR3Q02985 MFSD11-216ENST00000590393 1141 ntBASIC16.49■□□□□ 0.23
CFHR3Q02985 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CFHR3Q02985 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CFHR3Q02985 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CFHR3Q02985 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CFHR3Q02985 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CFHR3Q02985 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CFHR3Q02985 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CFHR3Q02985 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.48■□□□□ 0.23
CFHR3Q02985 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC16.48■□□□□ 0.23
CFHR3Q02985 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
CFHR3Q02985 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.48■□□□□ 0.23
CFHR3Q02985 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CFHR3Q02985 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CFHR3Q02985 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CFHR3Q02985 SLC7A5P2-201ENST00000553010 536 ntBASIC16.48■□□□□ 0.23
CFHR3Q02985 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.48■□□□□ 0.23
CFHR3Q02985 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.48■□□□□ 0.23
CFHR3Q02985 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.48■□□□□ 0.23
CFHR3Q02985 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CFHR3Q02985 AC080038.1-201ENST00000611274 1154 ntBASIC16.48■□□□□ 0.23
CFHR3Q02985 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CFHR3Q02985 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.48■□□□□ 0.23
CFHR3Q02985 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CFHR3Q02985 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CFHR3Q02985 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CFHR3Q02985 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.48■□□□□ 0.23
CFHR3Q02985 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CFHR3Q02985 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CFHR3Q02985 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CFHR3Q02985 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CFHR3Q02985 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CFHR3Q02985 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CFHR3Q02985 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CFHR3Q02985 KRT16P2-201ENST00000414673 1423 ntBASIC16.47■□□□□ 0.23
CFHR3Q02985 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CFHR3Q02985 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.47■□□□□ 0.23
CFHR3Q02985 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CFHR3Q02985 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CFHR3Q02985 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CFHR3Q02985 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.47■□□□□ 0.23
CFHR3Q02985 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.47■□□□□ 0.23
CFHR3Q02985 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CFHR3Q02985 AC011767.1-201ENST00000617410 1153 ntBASIC16.47■□□□□ 0.23
CFHR3Q02985 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CFHR3Q02985 RARRES2P11-201ENST00000635158 484 ntBASIC16.47■□□□□ 0.23
CFHR3Q02985 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CFHR3Q02985 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.47■□□□□ 0.23
CFHR3Q02985 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CFHR3Q02985 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CFHR3Q02985 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CFHR3Q02985 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CFHR3Q02985 AC061975.6-201ENST00000579045 1553 ntBASIC16.47■□□□□ 0.23
CFHR3Q02985 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.47■□□□□ 0.23
CFHR3Q02985 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.47■□□□□ 0.23
CFHR3Q02985 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
CFHR3Q02985 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.46■□□□□ 0.23
CFHR3Q02985 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CFHR3Q02985 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CFHR3Q02985 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.46■□□□□ 0.23
CFHR3Q02985 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CFHR3Q02985 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.46■□□□□ 0.23
CFHR3Q02985 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.46■□□□□ 0.23
CFHR3Q02985 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.46■□□□□ 0.23
CFHR3Q02985 RAP2CP1-201ENST00000605103 478 ntBASIC16.46■□□□□ 0.23
CFHR3Q02985 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CFHR3Q02985 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.46■□□□□ 0.23
CFHR3Q02985 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
CFHR3Q02985 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CFHR3Q02985 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.45■□□□□ 0.22
CFHR3Q02985 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CFHR3Q02985 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CFHR3Q02985 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms