Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.88■□□□□ 0.61
H3F3AP84243 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H3F3AP84243 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H3F3AP84243 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
H3F3AP84243 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.88■□□□□ 0.61
H3F3AP84243 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
H3F3AP84243 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.88■□□□□ 0.61
H3F3AP84243 NTF6G-201ENST00000591094 616 ntBASIC18.88■□□□□ 0.61
H3F3AP84243 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
H3F3AP84243 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
H3F3AP84243 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
H3F3AP84243 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
H3F3AP84243 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
H3F3AP84243 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.88■□□□□ 0.61
H3F3AP84243 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.88■□□□□ 0.61
H3F3AP84243 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H3F3AP84243 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.88■□□□□ 0.61
H3F3AP84243 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H3F3AP84243 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
H3F3AP84243 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
H3F3AP84243 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3F3AP84243 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3F3AP84243 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3F3AP84243 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3F3AP84243 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3F3AP84243 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3F3AP84243 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3F3AP84243 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.87■□□□□ 0.61
H3F3AP84243 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.87■□□□□ 0.61
H3F3AP84243 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3F3AP84243 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3F3AP84243 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3F3AP84243 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.87■□□□□ 0.61
H3F3AP84243 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
H3F3AP84243 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.87■□□□□ 0.61
H3F3AP84243 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3F3AP84243 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
H3F3AP84243 AC104187.1-201ENST00000607510 612 ntBASIC18.87■□□□□ 0.61
H3F3AP84243 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3F3AP84243 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.87■□□□□ 0.61
H3F3AP84243 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3F3AP84243 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3F3AP84243 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
H3F3AP84243 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
H3F3AP84243 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
H3F3AP84243 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
H3F3AP84243 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
H3F3AP84243 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
H3F3AP84243 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
H3F3AP84243 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
H3F3AP84243 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
H3F3AP84243 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
H3F3AP84243 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.86■□□□□ 0.61
H3F3AP84243 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
H3F3AP84243 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.86■□□□□ 0.61
H3F3AP84243 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.86■□□□□ 0.61
H3F3AP84243 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.86■□□□□ 0.61
H3F3AP84243 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
H3F3AP84243 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.86■□□□□ 0.61
H3F3AP84243 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
H3F3AP84243 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
H3F3AP84243 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
H3F3AP84243 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
H3F3AP84243 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
H3F3AP84243 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
H3F3AP84243 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
H3F3AP84243 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.85■□□□□ 0.61
H3F3AP84243 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
H3F3AP84243 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
H3F3AP84243 KRT18P5-201ENST00000436075 1291 ntBASIC18.85■□□□□ 0.61
H3F3AP84243 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.85■□□□□ 0.61
H3F3AP84243 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.85■□□□□ 0.61
H3F3AP84243 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
H3F3AP84243 Z98882.1-201ENST00000622160 2253 ntBASIC18.85■□□□□ 0.61
H3F3AP84243 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.85■□□□□ 0.61
H3F3AP84243 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
H3F3AP84243 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
H3F3AP84243 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H3F3AP84243 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.84■□□□□ 0.61
H3F3AP84243 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H3F3AP84243 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H3F3AP84243 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H3F3AP84243 KRT19P1-201ENST00000405746 1186 ntBASIC18.84■□□□□ 0.61
H3F3AP84243 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.84■□□□□ 0.61
H3F3AP84243 AC010141.2-201ENST00000452426 721 ntBASIC18.84■□□□□ 0.61
H3F3AP84243 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
H3F3AP84243 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H3F3AP84243 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
H3F3AP84243 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.84■□□□□ 0.61
H3F3AP84243 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.84■□□□□ 0.61
H3F3AP84243 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H3F3AP84243 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
H3F3AP84243 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.83■□□□□ 0.61
H3F3AP84243 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
H3F3AP84243 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
H3F3AP84243 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.83■□□□□ 0.61
H3F3AP84243 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
H3F3AP84243 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
H3F3AP84243 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.83■□□□□ 0.6
H3F3AP84243 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms