Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SRPXP78539 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SRPXP78539 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRPXP78539 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SRPXP78539 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.35■□□□□ 0.37
SRPXP78539 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.35■□□□□ 0.37
SRPXP78539 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SRPXP78539 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.35■□□□□ 0.37
SRPXP78539 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRPXP78539 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRPXP78539 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SRPXP78539 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SRPXP78539 AC006128.1-201ENST00000624704 1661 ntBASIC17.35■□□□□ 0.37
SRPXP78539 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.35■□□□□ 0.37
SRPXP78539 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.35■□□□□ 0.37
SRPXP78539 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRPXP78539 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.35■□□□□ 0.37
SRPXP78539 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SRPXP78539 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRPXP78539 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRPXP78539 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRPXP78539 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.34■□□□□ 0.37
SRPXP78539 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRPXP78539 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SRPXP78539 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
SRPXP78539 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.34■□□□□ 0.37
SRPXP78539 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRPXP78539 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRPXP78539 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRPXP78539 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRPXP78539 KRT125P-201ENST00000546827 989 ntBASIC17.34■□□□□ 0.37
SRPXP78539 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.34■□□□□ 0.37
SRPXP78539 Z92544.1-202ENST00000571933 1220 ntBASIC17.34■□□□□ 0.37
SRPXP78539 AP005212.1-201ENST00000581547 1997 ntBASIC17.34■□□□□ 0.37
SRPXP78539 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.34■□□□□ 0.37
SRPXP78539 AL451085.2-201ENST00000605085 799 ntBASIC17.34■□□□□ 0.37
SRPXP78539 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.34■□□□□ 0.37
SRPXP78539 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRPXP78539 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SRPXP78539 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRPXP78539 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SRPXP78539 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SRPXP78539 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SRPXP78539 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SRPXP78539 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.33■□□□□ 0.37
SRPXP78539 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
SRPXP78539 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SRPXP78539 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.33■□□□□ 0.37
SRPXP78539 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.33■□□□□ 0.37
SRPXP78539 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SRPXP78539 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SRPXP78539 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRPXP78539 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.33■□□□□ 0.36
SRPXP78539 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
SRPXP78539 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.33■□□□□ 0.36
SRPXP78539 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRPXP78539 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRPXP78539 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SRPXP78539 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SRPXP78539 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SRPXP78539 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SRPXP78539 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRPXP78539 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
SRPXP78539 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.32■□□□□ 0.36
SRPXP78539 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRPXP78539 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.32■□□□□ 0.36
SRPXP78539 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SRPXP78539 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRPXP78539 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.32■□□□□ 0.36
SRPXP78539 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SRPXP78539 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRPXP78539 AL117332.1-201ENST00000622628 974 ntBASIC17.32■□□□□ 0.36
SRPXP78539 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SRPXP78539 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRPXP78539 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRPXP78539 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SRPXP78539 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRPXP78539 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRPXP78539 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRPXP78539 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRPXP78539 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.31■□□□□ 0.36
SRPXP78539 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SRPXP78539 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SRPXP78539 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.31■□□□□ 0.36
SRPXP78539 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRPXP78539 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRPXP78539 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.31■□□□□ 0.36
SRPXP78539 AC010141.3-201ENST00000456659 717 ntBASIC17.31■□□□□ 0.36
SRPXP78539 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.31■□□□□ 0.36
SRPXP78539 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.31■□□□□ 0.36
SRPXP78539 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.31■□□□□ 0.36
SRPXP78539 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SRPXP78539 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRPXP78539 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.31■□□□□ 0.36
SRPXP78539 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRPXP78539 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRPXP78539 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SRPXP78539 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRPXP78539 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
SRPXP78539 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms