Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPS4XP62701 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.03■□□□□ 0.64
RPS4XP62701 AL354811.1-201ENST00000610286 706 ntBASIC19.03■□□□□ 0.64
RPS4XP62701 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.03■□□□□ 0.64
RPS4XP62701 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPS4XP62701 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPS4XP62701 AL049796.1-201ENST00000565336 1766 ntBASIC19.03■□□□□ 0.64
RPS4XP62701 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPS4XP62701 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RPS4XP62701 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPS4XP62701 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RPS4XP62701 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RPS4XP62701 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RPS4XP62701 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPS4XP62701 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.02■□□□□ 0.64
RPS4XP62701 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
RPS4XP62701 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.02■□□□□ 0.64
RPS4XP62701 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.02■□□□□ 0.64
RPS4XP62701 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
RPS4XP62701 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPS4XP62701 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPS4XP62701 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.02■□□□□ 0.64
RPS4XP62701 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.02■□□□□ 0.64
RPS4XP62701 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RPS4XP62701 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.02■□□□□ 0.64
RPS4XP62701 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.02■□□□□ 0.64
RPS4XP62701 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.02■□□□□ 0.64
RPS4XP62701 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.02■□□□□ 0.64
RPS4XP62701 AC105233.4-201ENST00000642045 216 ntBASIC19.02■□□□□ 0.64
RPS4XP62701 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RPS4XP62701 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RPS4XP62701 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RPS4XP62701 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RPS4XP62701 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RPS4XP62701 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPS4XP62701 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPS4XP62701 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPS4XP62701 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RPS4XP62701 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.01■□□□□ 0.63
RPS4XP62701 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.01■□□□□ 0.63
RPS4XP62701 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
RPS4XP62701 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPS4XP62701 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPS4XP62701 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.01■□□□□ 0.63
RPS4XP62701 AC123595.1-201ENST00000440769 1046 ntBASIC19.01■□□□□ 0.63
RPS4XP62701 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.01■□□□□ 0.63
RPS4XP62701 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
RPS4XP62701 AC012414.1-201ENST00000556676 535 ntBASIC19.01■□□□□ 0.63
RPS4XP62701 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.01■□□□□ 0.63
RPS4XP62701 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.01■□□□□ 0.63
RPS4XP62701 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.01■□□□□ 0.63
RPS4XP62701 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPS4XP62701 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RPS4XP62701 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPS4XP62701 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RPS4XP62701 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RPS4XP62701 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPS4XP62701 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19■□□□□ 0.63
RPS4XP62701 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
RPS4XP62701 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPS4XP62701 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19■□□□□ 0.63
RPS4XP62701 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RPS4XP62701 KRT18P5-201ENST00000436075 1291 ntBASIC19■□□□□ 0.63
RPS4XP62701 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19■□□□□ 0.63
RPS4XP62701 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RPS4XP62701 AL137784.2-201ENST00000607332 1000 ntBASIC19■□□□□ 0.63
RPS4XP62701 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RPS4XP62701 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPS4XP62701 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPS4XP62701 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19■□□□□ 0.63
RPS4XP62701 AC005224.4-201ENST00000583262 1652 ntBASIC19■□□□□ 0.63
RPS4XP62701 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
RPS4XP62701 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RPS4XP62701 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19■□□□□ 0.63
RPS4XP62701 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPS4XP62701 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPS4XP62701 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.99■□□□□ 0.63
RPS4XP62701 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPS4XP62701 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.99■□□□□ 0.63
RPS4XP62701 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPS4XP62701 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.99■□□□□ 0.63
RPS4XP62701 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RPS4XP62701 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPS4XP62701 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.99■□□□□ 0.63
RPS4XP62701 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.99■□□□□ 0.63
RPS4XP62701 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.99■□□□□ 0.63
RPS4XP62701 MIR6084-201ENST00000622012 110 ntBASIC18.99■□□□□ 0.63
RPS4XP62701 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.99■□□□□ 0.63
RPS4XP62701 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPS4XP62701 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RPS4XP62701 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RPS4XP62701 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS4XP62701 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS4XP62701 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS4XP62701 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.98■□□□□ 0.63
RPS4XP62701 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS4XP62701 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RPS4XP62701 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RPS4XP62701 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.98■□□□□ 0.63
RPS4XP62701 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms