Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN6P56747 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CLDN6P56747 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN6P56747 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.31■□□□□ 0.84
CLDN6P56747 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CLDN6P56747 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN6P56747 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN6P56747 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.3■□□□□ 0.84
CLDN6P56747 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CLDN6P56747 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.3■□□□□ 0.84
CLDN6P56747 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.3■□□□□ 0.84
CLDN6P56747 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN6P56747 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CLDN6P56747 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN6P56747 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN6P56747 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.3■□□□□ 0.84
CLDN6P56747 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.3■□□□□ 0.84
CLDN6P56747 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CLDN6P56747 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CLDN6P56747 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN6P56747 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN6P56747 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN6P56747 RBM17P2-201ENST00000616397 1405 ntBASIC20.29■□□□□ 0.84
CLDN6P56747 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CLDN6P56747 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN6P56747 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN6P56747 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CLDN6P56747 AL355472.2-201ENST00000422958 438 ntBASIC20.29■□□□□ 0.84
CLDN6P56747 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CLDN6P56747 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.29■□□□□ 0.84
CLDN6P56747 AL034346.1-201ENST00000568244 1277 ntBASIC20.29■□□□□ 0.84
CLDN6P56747 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.29■□□□□ 0.84
CLDN6P56747 AC008175.2-201ENST00000612840 297 ntBASIC20.29■□□□□ 0.84
CLDN6P56747 AC120498.10-201ENST00000621827 505 ntBASIC20.29■□□□□ 0.84
CLDN6P56747 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN6P56747 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN6P56747 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CLDN6P56747 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN6P56747 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CLDN6P56747 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN6P56747 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN6P56747 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.28■□□□□ 0.84
CLDN6P56747 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN6P56747 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.28■□□□□ 0.84
CLDN6P56747 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.28■□□□□ 0.84
CLDN6P56747 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CLDN6P56747 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.28■□□□□ 0.84
CLDN6P56747 AC026366.1-201ENST00000488803 879 ntBASIC20.28■□□□□ 0.84
CLDN6P56747 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.28■□□□□ 0.84
CLDN6P56747 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.28■□□□□ 0.84
CLDN6P56747 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN6P56747 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
CLDN6P56747 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN6P56747 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.28■□□□□ 0.84
CLDN6P56747 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN6P56747 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN6P56747 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.27■□□□□ 0.84
CLDN6P56747 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CLDN6P56747 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN6P56747 AC061975.6-201ENST00000579045 1553 ntBASIC20.27■□□□□ 0.84
CLDN6P56747 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CLDN6P56747 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.27■□□□□ 0.84
CLDN6P56747 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.27■□□□□ 0.84
CLDN6P56747 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.27■□□□□ 0.84
CLDN6P56747 UNC93B5-201ENST00000530315 699 ntBASIC20.27■□□□□ 0.84
CLDN6P56747 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.27■□□□□ 0.84
CLDN6P56747 AL591742.1-201ENST00000604433 565 ntBASIC20.27■□□□□ 0.84
CLDN6P56747 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN6P56747 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN6P56747 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.27■□□□□ 0.84
CLDN6P56747 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.27■□□□□ 0.83
CLDN6P56747 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CLDN6P56747 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLDN6P56747 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.26■□□□□ 0.83
CLDN6P56747 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN6P56747 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN6P56747 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN6P56747 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN6P56747 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN6P56747 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.26■□□□□ 0.83
CLDN6P56747 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.26■□□□□ 0.83
CLDN6P56747 AP003097.1-201ENST00000530657 1135 ntBASIC20.26■□□□□ 0.83
CLDN6P56747 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
CLDN6P56747 KRT17P1-201ENST00000399211 1546 ntBASIC20.26■□□□□ 0.83
CLDN6P56747 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN6P56747 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.26■□□□□ 0.83
CLDN6P56747 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN6P56747 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN6P56747 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
CLDN6P56747 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN6P56747 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN6P56747 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN6P56747 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN6P56747 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.25■□□□□ 0.83
CLDN6P56747 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN6P56747 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN6P56747 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN6P56747 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.25■□□□□ 0.83
CLDN6P56747 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CLDN6P56747 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms