Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXG1P55316 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXG1P55316 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXG1P55316 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.55■□□□□ 0.56
FOXG1P55316 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.55■□□□□ 0.56
FOXG1P55316 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.55■□□□□ 0.56
FOXG1P55316 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXG1P55316 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXG1P55316 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
FOXG1P55316 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXG1P55316 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXG1P55316 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.55■□□□□ 0.56
FOXG1P55316 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXG1P55316 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
FOXG1P55316 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXG1P55316 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXG1P55316 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXG1P55316 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
FOXG1P55316 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXG1P55316 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXG1P55316 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FOXG1P55316 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXG1P55316 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
FOXG1P55316 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXG1P55316 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
FOXG1P55316 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.54■□□□□ 0.56
FOXG1P55316 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.54■□□□□ 0.56
FOXG1P55316 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.54■□□□□ 0.56
FOXG1P55316 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.54■□□□□ 0.56
FOXG1P55316 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.54■□□□□ 0.56
FOXG1P55316 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXG1P55316 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.54■□□□□ 0.56
FOXG1P55316 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXG1P55316 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.53■□□□□ 0.56
FOXG1P55316 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FOXG1P55316 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
FOXG1P55316 AC079834.2-201ENST00000609776 1949 ntBASIC18.53■□□□□ 0.56
FOXG1P55316 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXG1P55316 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.53■□□□□ 0.56
FOXG1P55316 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.53■□□□□ 0.56
FOXG1P55316 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXG1P55316 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXG1P55316 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.53■□□□□ 0.56
FOXG1P55316 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.53■□□□□ 0.56
FOXG1P55316 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.53■□□□□ 0.56
FOXG1P55316 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FOXG1P55316 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXG1P55316 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.53■□□□□ 0.56
FOXG1P55316 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXG1P55316 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXG1P55316 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXG1P55316 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FOXG1P55316 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXG1P55316 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.53■□□□□ 0.56
FOXG1P55316 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXG1P55316 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.52■□□□□ 0.56
FOXG1P55316 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXG1P55316 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXG1P55316 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.52■□□□□ 0.56
FOXG1P55316 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXG1P55316 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.52■□□□□ 0.56
FOXG1P55316 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXG1P55316 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXG1P55316 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FOXG1P55316 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
FOXG1P55316 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
FOXG1P55316 MFSD11-216ENST00000590393 1141 ntBASIC18.52■□□□□ 0.56
FOXG1P55316 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.52■□□□□ 0.56
FOXG1P55316 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
FOXG1P55316 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.52■□□□□ 0.56
FOXG1P55316 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.52■□□□□ 0.55
FOXG1P55316 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.52■□□□□ 0.55
FOXG1P55316 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
FOXG1P55316 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
FOXG1P55316 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
FOXG1P55316 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
FOXG1P55316 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXG1P55316 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
FOXG1P55316 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.51■□□□□ 0.55
FOXG1P55316 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FOXG1P55316 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.51■□□□□ 0.55
FOXG1P55316 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.51■□□□□ 0.55
FOXG1P55316 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.51■□□□□ 0.55
FOXG1P55316 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.51■□□□□ 0.55
FOXG1P55316 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXG1P55316 MYCNOS-205ENST00000641950 531 ntBASIC18.51■□□□□ 0.55
FOXG1P55316 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.51■□□□□ 0.55
FOXG1P55316 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
FOXG1P55316 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXG1P55316 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
FOXG1P55316 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.5■□□□□ 0.55
FOXG1P55316 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXG1P55316 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.5■□□□□ 0.55
FOXG1P55316 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.5■□□□□ 0.55
FOXG1P55316 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.5■□□□□ 0.55
FOXG1P55316 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
FOXG1P55316 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXG1P55316 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FOXG1P55316 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FOXG1P55316 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms