Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 LRS4YDR439W 1044 nt2.49□□□□□ -2.01
SSU72P53538 YHL005CYHL005C 393 nt2.49□□□□□ -2.01
SSU72P53538 EPT1YHR123W 1176 nt2.49□□□□□ -2.01
SSU72P53538 AGE2YIL044C 897 nt2.49□□□□□ -2.01
SSU72P53538 YIL175WYIL175W 318 nt2.49□□□□□ -2.01
SSU72P53538 YIR023C-AYIR023C-A 324 nt2.49□□□□□ -2.01
SSU72P53538 GCD14YJL125C 1152 nt2.49□□□□□ -2.01
SSU72P53538 YJL222W-BYJL222W-B 138 nt2.49□□□□□ -2.01
SSU72P53538 SDH3YKL141W 597 nt2.49□□□□□ -2.01
SSU72P53538 YLR163W-AYLR163W-A 114 nt2.49□□□□□ -2.01
SSU72P53538 YPR078CYPR078C 1119 nt2.49□□□□□ -2.01
SSU72P53538 ICS2YBR157C 768 nt2.49□□□□□ -2.01
SSU72P53538 RGC1YPR115W 3252 nt2.49□□□□□ -2.01
SSU72P53538 RLI1YDR091C 1827 nt2.49□□□□□ -2.01
SSU72P53538 YJR061WYJR061W 2808 nt2.49□□□□□ -2.01
SSU72P53538 JJJ1YNL227C 1773 nt2.49□□□□□ -2.01
SSU72P53538 YML096WYML096W 1578 nt2.49□□□□□ -2.01
SSU72P53538 STE23YLR389C 3084 nt2.48□□□□□ -2.01
SSU72P53538 KAR1YNL188W 1302 nt2.48□□□□□ -2.01
SSU72P53538 MDM1YML104C 3384 nt2.48□□□□□ -2.01
SSU72P53538 YDR034C-DYDR034C-D 5313 nt2.48□□□□□ -2.01
SSU72P53538 TSC13YDL015C 933 nt2.48□□□□□ -2.01
SSU72P53538 PAU10YDR542W 363 nt2.48□□□□□ -2.01
SSU72P53538 SUP56tL(CAA)A 82 nt2.48□□□□□ -2.01
SSU72P53538 SUP53tL(CAA)C 82 nt2.48□□□□□ -2.01
SSU72P53538 tL(CAA)DtL(CAA)D 82 nt2.48□□□□□ -2.01
SSU72P53538 tL(CAA)G1tL(CAA)G1 82 nt2.48□□□□□ -2.01
SSU72P53538 SUP54tL(CAA)G2 82 nt2.48□□□□□ -2.01
SSU72P53538 tL(CAA)G3tL(CAA)G3 82 nt2.48□□□□□ -2.01
SSU72P53538 tL(CAA)KtL(CAA)K 82 nt2.48□□□□□ -2.01
SSU72P53538 tL(CAA)LtL(CAA)L 82 nt2.48□□□□□ -2.01
SSU72P53538 tL(CAA)MtL(CAA)M 82 nt2.48□□□□□ -2.01
SSU72P53538 tL(CAA)NtL(CAA)N 82 nt2.48□□□□□ -2.01
SSU72P53538 PAU11YGL261C 363 nt2.48□□□□□ -2.01
SSU72P53538 PAU13YHL046C 363 nt2.48□□□□□ -2.01
SSU72P53538 DOG1YHR044C 741 nt2.48□□□□□ -2.01
SSU72P53538 SED5YLR026C 1023 nt2.48□□□□□ -2.01
SSU72P53538 VMA6YLR447C 1038 nt2.48□□□□□ -2.01
SSU72P53538 PAU4YLR461W 363 nt2.48□□□□□ -2.01
SSU72P53538 RPL6AYML073C 531 nt2.48□□□□□ -2.01
SSU72P53538 DUG3YNL191W 1074 nt2.48□□□□□ -2.01
SSU72P53538 ATG34YOL083W 1239 nt2.48□□□□□ -2.01
SSU72P53538 HSP10YOR020C 321 nt2.48□□□□□ -2.01
SSU72P53538 THI80YOR143C 960 nt2.48□□□□□ -2.01
SSU72P53538 RRG7YOR305W 729 nt2.48□□□□□ -2.01
SSU72P53538 YIL080WYIL080W 4722 nt2.48□□□□□ -2.01
SSU72P53538 YDR098C-BYDR098C-B 5268 nt2.48□□□□□ -2.01
SSU72P53538 YDR210C-DYDR210C-D 5268 nt2.48□□□□□ -2.01
SSU72P53538 YDR316W-BYDR316W-B 5268 nt2.48□□□□□ -2.01
SSU72P53538 YDR365W-BYDR365W-B 5268 nt2.48□□□□□ -2.01
SSU72P53538 YER138CYER138C 5268 nt2.48□□□□□ -2.01
SSU72P53538 YER160CYER160C 5268 nt2.48□□□□□ -2.01
SSU72P53538 YGR038C-BYGR038C-B 5268 nt2.48□□□□□ -2.01
SSU72P53538 YGR161C-DYGR161C-D 5268 nt2.48□□□□□ -2.01
SSU72P53538 YJR027WYJR027W 5268 nt2.48□□□□□ -2.01
SSU72P53538 YLR157C-BYLR157C-B 5268 nt2.48□□□□□ -2.01
SSU72P53538 YML039WYML039W 5268 nt2.48□□□□□ -2.01
SSU72P53538 YML045WYML045W 5268 nt2.48□□□□□ -2.01
SSU72P53538 YMR050CYMR050C 5268 nt2.48□□□□□ -2.01
SSU72P53538 YOL103W-BYOL103W-B 5268 nt2.48□□□□□ -2.01
SSU72P53538 YBR012W-BYBR012W-B 5271 nt2.48□□□□□ -2.01
SSU72P53538 YOR142W-BYOR142W-B 5268 nt2.48□□□□□ -2.01
SSU72P53538 YPL257W-BYPL257W-B 5268 nt2.48□□□□□ -2.01
SSU72P53538 YPR158W-BYPR158W-B 5271 nt2.48□□□□□ -2.01
SSU72P53538 NUM1YDR150W 8247 nt2.47□□□□□ -2.01
SSU72P53538 YLR278CYLR278C 4026 nt2.47□□□□□ -2.01
SSU72P53538 VHR1YIL056W 1923 nt2.47□□□□□ -2.01
SSU72P53538 RAD55YDR076W 1221 nt2.47□□□□□ -2.01
SSU72P53538 PLP1YDR183W 693 nt2.47□□□□□ -2.01
SSU72P53538 HTA1YDR225W 399 nt2.47□□□□□ -2.01
SSU72P53538 YFR032C-BYFR032C-B 264 nt2.47□□□□□ -2.01
SSU72P53538 RPB9YGL070C 369 nt2.47□□□□□ -2.01
SSU72P53538 tQ(UUG)BtQ(UUG)B 72 nt2.47□□□□□ -2.01
SSU72P53538 GTT1YIR038C 705 nt2.47□□□□□ -2.01
SSU72P53538 GTT2YLL060C 702 nt2.47□□□□□ -2.01
SSU72P53538 PML39YML107C 1005 nt2.47□□□□□ -2.01
SSU72P53538 TRM112YNR046W 408 nt2.47□□□□□ -2.01
SSU72P53538 YOL038C-AYOL038C-A 96 nt2.47□□□□□ -2.01
SSU72P53538 PNO1YOR145C 825 nt2.47□□□□□ -2.01
SSU72P53538 RPA43YOR340C 981 nt2.47□□□□□ -2.01
SSU72P53538 SWD3YBR175W 948 nt2.47□□□□□ -2.01
SSU72P53538 AVT2YEL064C 1443 nt2.47□□□□□ -2.01
SSU72P53538 SEC27YGL137W 2670 nt2.47□□□□□ -2.01
SSU72P53538 ORC2YBR060C 1863 nt2.47□□□□□ -2.01
SSU72P53538 CDC20YGL116W 1833 nt2.47□□□□□ -2.01
SSU72P53538 21S_rRNA21S_rRNA 3296 nt2.46□□□□□ -2.01
SSU72P53538 PAM1YDR251W 2493 nt2.46□□□□□ -2.02
SSU72P53538 YLR001CYLR001C 2589 nt2.46□□□□□ -2.02
SSU72P53538 snR78snR78 87 nt2.46□□□□□ -2.02
SSU72P53538 YGR073CYGR073C 372 nt2.46□□□□□ -2.02
SSU72P53538 PTI1YGR156W 1278 nt2.46□□□□□ -2.02
SSU72P53538 PIR1YKL164C 1026 nt2.46□□□□□ -2.02
SSU72P53538 YPL035CYPL035C 348 nt2.46□□□□□ -2.02
SSU72P53538 MON1YGL124C 1935 nt2.46□□□□□ -2.02
SSU72P53538 TOR1YJR066W 7413 nt2.45□□□□□ -2.02
SSU72P53538 SLI1YGR212W 1407 nt2.45□□□□□ -2.02
SSU72P53538 SPT15YER148W 723 nt2.45□□□□□ -2.02
SSU72P53538 YGL138CYGL138C 1038 nt2.45□□□□□ -2.02
SSU72P53538 YGR293CYGR293C 462 nt2.45□□□□□ -2.02
SSU72P53538 SNX4YJL036W 1272 nt2.45□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 23.2 ms