Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRP9P49458 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SRP9P49458 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SRP9P49458 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.61■□□□□ 0.57
SRP9P49458 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.61■□□□□ 0.57
SRP9P49458 AC099791.1-201ENST00000416440 715 ntBASIC18.61■□□□□ 0.57
SRP9P49458 AC091305.1-201ENST00000479476 895 ntBASIC18.61■□□□□ 0.57
SRP9P49458 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.61■□□□□ 0.57
SRP9P49458 AC010525.1-201ENST00000585559 441 ntBASIC18.61■□□□□ 0.57
SRP9P49458 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.61■□□□□ 0.57
SRP9P49458 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRP9P49458 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRP9P49458 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SRP9P49458 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRP9P49458 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.6■□□□□ 0.57
SRP9P49458 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRP9P49458 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.6■□□□□ 0.57
SRP9P49458 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SRP9P49458 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SRP9P49458 RASA4CP-201ENST00000424092 1398 ntBASIC18.6■□□□□ 0.57
SRP9P49458 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRP9P49458 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRP9P49458 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SRP9P49458 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRP9P49458 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRP9P49458 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRP9P49458 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRP9P49458 MIR939-201ENST00000401314 82 ntBASIC18.6■□□□□ 0.57
SRP9P49458 AP005435.1-201ENST00000529293 1178 ntBASIC18.6■□□□□ 0.57
SRP9P49458 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SRP9P49458 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SRP9P49458 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.6■□□□□ 0.57
SRP9P49458 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SRP9P49458 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.6■□□□□ 0.57
SRP9P49458 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SRP9P49458 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRP9P49458 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
SRP9P49458 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SRP9P49458 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SRP9P49458 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SRP9P49458 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SRP9P49458 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.59■□□□□ 0.57
SRP9P49458 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SRP9P49458 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SRP9P49458 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SRP9P49458 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.59■□□□□ 0.57
SRP9P49458 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SRP9P49458 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SRP9P49458 SUDS3P1-201ENST00000505831 966 ntBASIC18.59■□□□□ 0.57
SRP9P49458 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.59■□□□□ 0.57
SRP9P49458 AL031432.3-201ENST00000607698 485 ntBASIC18.59■□□□□ 0.57
SRP9P49458 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.59■□□□□ 0.57
SRP9P49458 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.59■□□□□ 0.57
SRP9P49458 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SRP9P49458 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SRP9P49458 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SRP9P49458 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
SRP9P49458 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SRP9P49458 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.59■□□□□ 0.57
SRP9P49458 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.59■□□□□ 0.57
SRP9P49458 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SRP9P49458 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SRP9P49458 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
SRP9P49458 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SRP9P49458 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
SRP9P49458 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SRP9P49458 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
SRP9P49458 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SRP9P49458 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.58■□□□□ 0.56
SRP9P49458 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.58■□□□□ 0.56
SRP9P49458 AL136967.2-201ENST00000623968 743 ntBASIC18.58■□□□□ 0.56
SRP9P49458 AL031602.1-201ENST00000633169 911 ntBASIC18.58■□□□□ 0.56
SRP9P49458 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SRP9P49458 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SRP9P49458 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SRP9P49458 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.58■□□□□ 0.56
SRP9P49458 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SRP9P49458 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SRP9P49458 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SRP9P49458 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SRP9P49458 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.58■□□□□ 0.56
SRP9P49458 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SRP9P49458 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SRP9P49458 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.57■□□□□ 0.56
SRP9P49458 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRP9P49458 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SRP9P49458 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.57■□□□□ 0.56
SRP9P49458 CA15P2-201ENST00000611168 834 ntBASIC18.57■□□□□ 0.56
SRP9P49458 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SRP9P49458 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.57■□□□□ 0.56
SRP9P49458 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRP9P49458 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRP9P49458 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRP9P49458 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SRP9P49458 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SRP9P49458 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.57■□□□□ 0.56
SRP9P49458 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SRP9P49458 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SRP9P49458 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.56■□□□□ 0.56
SRP9P49458 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms