Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SSR2P43308 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SSR2P43308 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SSR2P43308 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SSR2P43308 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SSR2P43308 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.11■□□□□ 0.81
SSR2P43308 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.1■□□□□ 0.81
SSR2P43308 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.1■□□□□ 0.81
SSR2P43308 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.1■□□□□ 0.81
SSR2P43308 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SSR2P43308 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SSR2P43308 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.1■□□□□ 0.81
SSR2P43308 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SSR2P43308 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.1■□□□□ 0.81
SSR2P43308 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SSR2P43308 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.1■□□□□ 0.81
SSR2P43308 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.1■□□□□ 0.81
SSR2P43308 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SSR2P43308 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SSR2P43308 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SSR2P43308 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.1■□□□□ 0.81
SSR2P43308 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SSR2P43308 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.1■□□□□ 0.81
SSR2P43308 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.1■□□□□ 0.81
SSR2P43308 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SSR2P43308 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.09■□□□□ 0.81
SSR2P43308 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.09■□□□□ 0.81
SSR2P43308 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SSR2P43308 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.09■□□□□ 0.81
SSR2P43308 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSR2P43308 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.09■□□□□ 0.81
SSR2P43308 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.09■□□□□ 0.81
SSR2P43308 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.09■□□□□ 0.81
SSR2P43308 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.09■□□□□ 0.81
SSR2P43308 KRT87P-202ENST00000534226 1464 ntBASIC20.09■□□□□ 0.81
SSR2P43308 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SSR2P43308 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSR2P43308 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
SSR2P43308 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSR2P43308 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSR2P43308 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSR2P43308 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSR2P43308 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSR2P43308 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSR2P43308 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSR2P43308 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSR2P43308 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SSR2P43308 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.08■□□□□ 0.81
SSR2P43308 AC026310.3-201ENST00000625186 2373 ntBASIC20.08■□□□□ 0.81
SSR2P43308 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SSR2P43308 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SSR2P43308 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SSR2P43308 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SSR2P43308 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SSR2P43308 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.08■□□□□ 0.81
SSR2P43308 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SSR2P43308 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SSR2P43308 CCDC92B-201ENST00000575506 885 ntBASIC20.08■□□□□ 0.81
SSR2P43308 TERF1P2-201ENST00000583350 1212 ntBASIC20.08■□□□□ 0.81
SSR2P43308 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.08■□□□□ 0.81
SSR2P43308 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SSR2P43308 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
SSR2P43308 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.08■□□□□ 0.8
SSR2P43308 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSR2P43308 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSR2P43308 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SSR2P43308 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSR2P43308 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SSR2P43308 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SSR2P43308 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.07■□□□□ 0.8
SSR2P43308 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.07■□□□□ 0.8
SSR2P43308 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.07■□□□□ 0.8
SSR2P43308 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.07■□□□□ 0.8
SSR2P43308 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
SSR2P43308 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSR2P43308 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SSR2P43308 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSR2P43308 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.07■□□□□ 0.8
SSR2P43308 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.07■□□□□ 0.8
SSR2P43308 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSR2P43308 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSR2P43308 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SSR2P43308 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SSR2P43308 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSR2P43308 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.06■□□□□ 0.8
SSR2P43308 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SSR2P43308 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.06■□□□□ 0.8
SSR2P43308 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.06■□□□□ 0.8
SSR2P43308 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSR2P43308 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.06■□□□□ 0.8
SSR2P43308 KRT18P14-201ENST00000534205 1250 ntBASIC20.06■□□□□ 0.8
SSR2P43308 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.06■□□□□ 0.8
SSR2P43308 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.06■□□□□ 0.8
SSR2P43308 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.06■□□□□ 0.8
SSR2P43308 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SSR2P43308 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SSR2P43308 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SSR2P43308 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.06■□□□□ 0.8
SSR2P43308 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.06■□□□□ 0.8
SSR2P43308 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms