Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.74■■□□□ 1.87
RFC4P35249 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RFC4P35249 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RFC4P35249 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
RFC4P35249 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC26.74■■□□□ 1.87
RFC4P35249 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC26.74■■□□□ 1.87
RFC4P35249 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC26.74■■□□□ 1.87
RFC4P35249 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RFC4P35249 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC26.74■■□□□ 1.87
RFC4P35249 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
RFC4P35249 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC26.74■■□□□ 1.87
RFC4P35249 AC137767.1-201ENST00000602918 1920 ntBASIC26.74■■□□□ 1.87
RFC4P35249 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RFC4P35249 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC26.73■■□□□ 1.87
RFC4P35249 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RFC4P35249 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC26.73■■□□□ 1.87
RFC4P35249 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
RFC4P35249 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
RFC4P35249 NME6-213ENST00000451657 871 ntTSL 2 BASIC26.73■■□□□ 1.87
RFC4P35249 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC26.73■■□□□ 1.87
RFC4P35249 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RFC4P35249 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC26.72■■□□□ 1.87
RFC4P35249 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RFC4P35249 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
RFC4P35249 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC26.72■■□□□ 1.87
RFC4P35249 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC26.72■■□□□ 1.87
RFC4P35249 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC26.72■■□□□ 1.87
RFC4P35249 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC26.72■■□□□ 1.87
RFC4P35249 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC26.72■■□□□ 1.87
RFC4P35249 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC26.72■■□□□ 1.87
RFC4P35249 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RFC4P35249 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RFC4P35249 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
RFC4P35249 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.71■■□□□ 1.87
RFC4P35249 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
RFC4P35249 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC26.71■■□□□ 1.87
RFC4P35249 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
RFC4P35249 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC26.71■■□□□ 1.87
RFC4P35249 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC26.71■■□□□ 1.87
RFC4P35249 AC060766.5-201ENST00000590539 871 ntBASIC26.71■■□□□ 1.87
RFC4P35249 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC26.71■■□□□ 1.87
RFC4P35249 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC26.71■■□□□ 1.87
RFC4P35249 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.71■■□□□ 1.87
RFC4P35249 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC26.71■■□□□ 1.87
RFC4P35249 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
RFC4P35249 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
RFC4P35249 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC26.7■■□□□ 1.87
RFC4P35249 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC26.7■■□□□ 1.86
RFC4P35249 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC26.7■■□□□ 1.86
RFC4P35249 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC26.7■■□□□ 1.86
RFC4P35249 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
RFC4P35249 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
RFC4P35249 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RFC4P35249 MIR718-201ENST00000390190 70 ntBASIC26.69■■□□□ 1.86
RFC4P35249 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
RFC4P35249 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC26.69■■□□□ 1.86
RFC4P35249 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
RFC4P35249 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC26.69■■□□□ 1.86
RFC4P35249 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
RFC4P35249 FAM197Y4-202ENST00000622692 608 ntBASIC26.69■■□□□ 1.86
RFC4P35249 HLA-B-256ENST00000639848 1089 ntBASIC26.69■■□□□ 1.86
RFC4P35249 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RFC4P35249 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC26.69■■□□□ 1.86
RFC4P35249 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
RFC4P35249 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
RFC4P35249 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
RFC4P35249 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC26.68■■□□□ 1.86
RFC4P35249 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC26.68■■□□□ 1.86
RFC4P35249 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC26.68■■□□□ 1.86
RFC4P35249 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RFC4P35249 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC26.67■■□□□ 1.86
RFC4P35249 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
RFC4P35249 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
RFC4P35249 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
RFC4P35249 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RFC4P35249 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
RFC4P35249 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RFC4P35249 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
RFC4P35249 RPPH1-201ENST00000516869 333 ntBASIC26.67■■□□□ 1.86
RFC4P35249 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC26.67■■□□□ 1.86
RFC4P35249 CYP2T3P-201ENST00000601990 817 ntBASIC26.67■■□□□ 1.86
RFC4P35249 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC26.67■■□□□ 1.86
RFC4P35249 FAM21FP-204ENST00000608637 956 ntBASIC26.67■■□□□ 1.86
RFC4P35249 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RFC4P35249 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RFC4P35249 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
RFC4P35249 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RFC4P35249 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
RFC4P35249 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RFC4P35249 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC26.66■■□□□ 1.86
RFC4P35249 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC26.66■■□□□ 1.86
RFC4P35249 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
RFC4P35249 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
RFC4P35249 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC26.66■■□□□ 1.86
RFC4P35249 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
RFC4P35249 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
RFC4P35249 C1QBPP2-201ENST00000528754 825 ntBASIC26.65■■□□□ 1.86
RFC4P35249 RNF121-214ENST00000533380 870 ntTSL 3 BASIC26.65■■□□□ 1.86
RFC4P35249 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC26.65■■□□□ 1.86
RFC4P35249 AC100791.3-201ENST00000617619 330 ntBASIC26.65■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms