Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC6A4P31645 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SLC6A4P31645 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SLC6A4P31645 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SLC6A4P31645 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC6A4P31645 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC6A4P31645 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC6A4P31645 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC6A4P31645 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC6A4P31645 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC6A4P31645 CROCCP5-201ENST00000436658 830 ntBASIC21.72■■□□□ 1.07
SLC6A4P31645 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC6A4P31645 SLC7A5P1-201ENST00000568957 537 ntBASIC21.72■■□□□ 1.07
SLC6A4P31645 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
SLC6A4P31645 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SLC6A4P31645 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC6A4P31645 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC6A4P31645 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC6A4P31645 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC6A4P31645 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC6A4P31645 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC6A4P31645 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.71■■□□□ 1.07
SLC6A4P31645 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.71■■□□□ 1.07
SLC6A4P31645 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.71■■□□□ 1.07
SLC6A4P31645 AC010536.3-201ENST00000620306 533 ntBASIC21.71■■□□□ 1.07
SLC6A4P31645 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.71■■□□□ 1.07
SLC6A4P31645 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC6A4P31645 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC6A4P31645 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC6A4P31645 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SLC6A4P31645 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC6A4P31645 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.71■■□□□ 1.07
SLC6A4P31645 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC6A4P31645 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.7■■□□□ 1.07
SLC6A4P31645 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
SLC6A4P31645 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.07
SLC6A4P31645 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC6A4P31645 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.7■■□□□ 1.06
SLC6A4P31645 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC6A4P31645 CNN2P6-201ENST00000439038 900 ntBASIC21.7■■□□□ 1.06
SLC6A4P31645 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.7■■□□□ 1.06
SLC6A4P31645 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.7■■□□□ 1.06
SLC6A4P31645 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
SLC6A4P31645 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.7■■□□□ 1.06
SLC6A4P31645 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.7■■□□□ 1.06
SLC6A4P31645 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SLC6A4P31645 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC6A4P31645 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.7■■□□□ 1.06
SLC6A4P31645 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC6A4P31645 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.7■■□□□ 1.06
SLC6A4P31645 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SLC6A4P31645 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.69■■□□□ 1.06
SLC6A4P31645 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SLC6A4P31645 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC6A4P31645 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SLC6A4P31645 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
SLC6A4P31645 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SLC6A4P31645 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.69■■□□□ 1.06
SLC6A4P31645 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.69■■□□□ 1.06
SLC6A4P31645 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.69■■□□□ 1.06
SLC6A4P31645 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SLC6A4P31645 AC120498.10-201ENST00000621827 505 ntBASIC21.69■■□□□ 1.06
SLC6A4P31645 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SLC6A4P31645 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC6A4P31645 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.69■■□□□ 1.06
SLC6A4P31645 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC6A4P31645 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC6A4P31645 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.69■■□□□ 1.06
SLC6A4P31645 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC6A4P31645 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC6A4P31645 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC6A4P31645 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC6A4P31645 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC6A4P31645 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.68■■□□□ 1.06
SLC6A4P31645 KRT16P2-201ENST00000414673 1423 ntBASIC21.68■■□□□ 1.06
SLC6A4P31645 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC6A4P31645 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC6A4P31645 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC6A4P31645 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC6A4P31645 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC6A4P31645 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC6A4P31645 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.67■■□□□ 1.06
SLC6A4P31645 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
SLC6A4P31645 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC6A4P31645 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC6A4P31645 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
SLC6A4P31645 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.67■■□□□ 1.06
SLC6A4P31645 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.67■■□□□ 1.06
SLC6A4P31645 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC6A4P31645 MIR663A-201ENST00000385250 93 ntBASIC21.67■■□□□ 1.06
SLC6A4P31645 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC6A4P31645 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.67■■□□□ 1.06
SLC6A4P31645 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.67■■□□□ 1.06
SLC6A4P31645 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.67■■□□□ 1.06
SLC6A4P31645 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SLC6A4P31645 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.67■■□□□ 1.06
SLC6A4P31645 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.67■■□□□ 1.06
SLC6A4P31645 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.67■■□□□ 1.06
SLC6A4P31645 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC6A4P31645 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms