Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LCN1P31025 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.48■□□□□ 0.71
LCN1P31025 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
LCN1P31025 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.47■□□□□ 0.71
LCN1P31025 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCN1P31025 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCN1P31025 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCN1P31025 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LCN1P31025 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCN1P31025 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.47■□□□□ 0.71
LCN1P31025 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.47■□□□□ 0.71
LCN1P31025 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.47■□□□□ 0.71
LCN1P31025 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCN1P31025 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCN1P31025 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCN1P31025 KRT87P-202ENST00000534226 1464 ntBASIC19.47■□□□□ 0.71
LCN1P31025 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCN1P31025 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCN1P31025 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCN1P31025 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LCN1P31025 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
LCN1P31025 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LCN1P31025 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LCN1P31025 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LCN1P31025 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.46■□□□□ 0.71
LCN1P31025 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LCN1P31025 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.46■□□□□ 0.71
LCN1P31025 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.46■□□□□ 0.71
LCN1P31025 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
LCN1P31025 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
LCN1P31025 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LCN1P31025 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.46■□□□□ 0.71
LCN1P31025 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
LCN1P31025 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LCN1P31025 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LCN1P31025 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LCN1P31025 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LCN1P31025 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LCN1P31025 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LCN1P31025 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.45■□□□□ 0.7
LCN1P31025 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
LCN1P31025 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.45■□□□□ 0.7
LCN1P31025 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LCN1P31025 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.45■□□□□ 0.7
LCN1P31025 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.45■□□□□ 0.7
LCN1P31025 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
LCN1P31025 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LCN1P31025 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
LCN1P31025 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
LCN1P31025 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
LCN1P31025 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LCN1P31025 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
LCN1P31025 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LCN1P31025 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LCN1P31025 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LCN1P31025 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LCN1P31025 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LCN1P31025 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.44■□□□□ 0.7
LCN1P31025 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LCN1P31025 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.44■□□□□ 0.7
LCN1P31025 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LCN1P31025 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LCN1P31025 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.44■□□□□ 0.7
LCN1P31025 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.44■□□□□ 0.7
LCN1P31025 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.44■□□□□ 0.7
LCN1P31025 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LCN1P31025 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LCN1P31025 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LCN1P31025 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LCN1P31025 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.44■□□□□ 0.7
LCN1P31025 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LCN1P31025 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LCN1P31025 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LCN1P31025 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.44■□□□□ 0.7
LCN1P31025 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.44■□□□□ 0.7
LCN1P31025 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.44■□□□□ 0.7
LCN1P31025 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LCN1P31025 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LCN1P31025 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LCN1P31025 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.43■□□□□ 0.7
LCN1P31025 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LCN1P31025 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LCN1P31025 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LCN1P31025 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.43■□□□□ 0.7
LCN1P31025 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.43■□□□□ 0.7
LCN1P31025 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.43■□□□□ 0.7
LCN1P31025 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.43■□□□□ 0.7
LCN1P31025 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.43■□□□□ 0.7
LCN1P31025 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LCN1P31025 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
LCN1P31025 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LCN1P31025 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LCN1P31025 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LCN1P31025 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LCN1P31025 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LCN1P31025 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LCN1P31025 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LCN1P31025 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LCN1P31025 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LCN1P31025 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms