Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AL023875.1-201ENST00000640777 796 ntBASIC28.16■■■□□ 2.1
RXRBP28702 AL353803.4-201ENST00000565882 1934 ntBASIC28.16■■■□□ 2.1
RXRBP28702 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
RXRBP28702 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RXRBP28702 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RXRBP28702 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC28.15■■■□□ 2.1
RXRBP28702 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC28.15■■■□□ 2.1
RXRBP28702 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RXRBP28702 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RXRBP28702 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC28.15■■■□□ 2.1
RXRBP28702 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC28.15■■■□□ 2.1
RXRBP28702 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RXRBP28702 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RXRBP28702 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RXRBP28702 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RXRBP28702 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RXRBP28702 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC28.14■■■□□ 2.1
RXRBP28702 AL589743.5-201ENST00000616611 1050 ntBASIC28.14■■■□□ 2.1
RXRBP28702 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
RXRBP28702 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
RXRBP28702 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC28.13■■■□□ 2.09
RXRBP28702 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
RXRBP28702 AC145285.6-201ENST00000604632 637 ntBASIC28.13■■■□□ 2.09
RXRBP28702 AC100791.3-201ENST00000617619 330 ntBASIC28.13■■■□□ 2.09
RXRBP28702 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC28.13■■■□□ 2.09
RXRBP28702 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC28.13■■■□□ 2.09
RXRBP28702 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
RXRBP28702 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
RXRBP28702 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
RXRBP28702 KRT16P2-201ENST00000414673 1423 ntBASIC28.12■■■□□ 2.09
RXRBP28702 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
RXRBP28702 MIR6786-201ENST00000616843 113 ntBASIC28.12■■■□□ 2.09
RXRBP28702 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC28.12■■■□□ 2.09
RXRBP28702 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
RXRBP28702 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
RXRBP28702 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
RXRBP28702 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC28.12■■■□□ 2.09
RXRBP28702 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
RXRBP28702 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
RXRBP28702 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
RXRBP28702 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RXRBP28702 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
RXRBP28702 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC28.11■■■□□ 2.09
RXRBP28702 CD44-222ENST00000526025 1052 ntTSL 2 BASIC28.11■■■□□ 2.09
RXRBP28702 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
RXRBP28702 NTF6B-201ENST00000591913 560 ntBASIC28.11■■■□□ 2.09
RXRBP28702 KLF2-202ENST00000592003 564 ntTSL 3 BASIC28.11■■■□□ 2.09
RXRBP28702 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RXRBP28702 AC110285.5-201ENST00000611501 352 ntBASIC28.11■■■□□ 2.09
RXRBP28702 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC28.11■■■□□ 2.09
RXRBP28702 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC28.11■■■□□ 2.09
RXRBP28702 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RXRBP28702 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RXRBP28702 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
RXRBP28702 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RXRBP28702 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC28.1■■■□□ 2.09
RXRBP28702 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
RXRBP28702 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
RXRBP28702 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RXRBP28702 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RXRBP28702 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
RXRBP28702 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC28.09■■■□□ 2.09
RXRBP28702 AC239809.2-201ENST00000415381 517 ntBASIC28.09■■■□□ 2.09
RXRBP28702 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC28.09■■■□□ 2.09
RXRBP28702 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
RXRBP28702 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
RXRBP28702 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
RXRBP28702 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
RXRBP28702 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
RXRBP28702 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
RXRBP28702 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC28.08■■■□□ 2.09
RXRBP28702 RARRES2P10-201ENST00000564312 460 ntBASIC28.08■■■□□ 2.09
RXRBP28702 AC026471.5-201ENST00000615068 467 ntBASIC28.08■■■□□ 2.09
RXRBP28702 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC28.07■■■□□ 2.08
RXRBP28702 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
RXRBP28702 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
RXRBP28702 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
RXRBP28702 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
RXRBP28702 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC28.07■■■□□ 2.08
RXRBP28702 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC28.07■■■□□ 2.08
RXRBP28702 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC28.07■■■□□ 2.08
RXRBP28702 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
RXRBP28702 AP003071.4-201ENST00000562276 1284 ntBASIC28.07■■■□□ 2.08
RXRBP28702 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC28.07■■■□□ 2.08
RXRBP28702 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
RXRBP28702 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC28.07■■■□□ 2.08
RXRBP28702 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
RXRBP28702 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
RXRBP28702 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
RXRBP28702 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC28.06■■■□□ 2.08
RXRBP28702 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
RXRBP28702 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
RXRBP28702 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
RXRBP28702 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC28.06■■■□□ 2.08
RXRBP28702 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC28.06■■■□□ 2.08
RXRBP28702 AC087388.1-201ENST00000571370 1112 ntBASIC28.06■■■□□ 2.08
RXRBP28702 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
RXRBP28702 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC28.06■■■□□ 2.08
RXRBP28702 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
RXRBP28702 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms