Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HIST1H1CP16403 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HIST1H1CP16403 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HIST1H1CP16403 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIST1H1CP16403 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HIST1H1CP16403 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.91■□□□□ 0.62
HIST1H1CP16403 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HIST1H1CP16403 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H1CP16403 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H1CP16403 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H1CP16403 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.9■□□□□ 0.62
HIST1H1CP16403 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HIST1H1CP16403 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H1CP16403 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H1CP16403 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H1CP16403 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H1CP16403 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H1CP16403 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H1CP16403 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.9■□□□□ 0.62
HIST1H1CP16403 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.9■□□□□ 0.62
HIST1H1CP16403 AC131212.1-201ENST00000613771 668 ntBASIC18.9■□□□□ 0.62
HIST1H1CP16403 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST1H1CP16403 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.9■□□□□ 0.62
HIST1H1CP16403 AC073130.3-201ENST00000624389 2278 ntBASIC18.9■□□□□ 0.62
HIST1H1CP16403 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.9■□□□□ 0.62
HIST1H1CP16403 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
HIST1H1CP16403 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
HIST1H1CP16403 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
HIST1H1CP16403 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
HIST1H1CP16403 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HIST1H1CP16403 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST1H1CP16403 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST1H1CP16403 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
HIST1H1CP16403 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.89■□□□□ 0.61
HIST1H1CP16403 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.89■□□□□ 0.61
HIST1H1CP16403 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.89■□□□□ 0.61
HIST1H1CP16403 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HIST1H1CP16403 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HIST1H1CP16403 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.89■□□□□ 0.61
HIST1H1CP16403 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HIST1H1CP16403 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST1H1CP16403 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HIST1H1CP16403 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H1CP16403 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.88■□□□□ 0.61
HIST1H1CP16403 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.88■□□□□ 0.61
HIST1H1CP16403 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H1CP16403 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.88■□□□□ 0.61
HIST1H1CP16403 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H1CP16403 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.88■□□□□ 0.61
HIST1H1CP16403 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
HIST1H1CP16403 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H1CP16403 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HIST1H1CP16403 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.88■□□□□ 0.61
HIST1H1CP16403 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H1CP16403 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HIST1H1CP16403 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HIST1H1CP16403 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.88■□□□□ 0.61
HIST1H1CP16403 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H1CP16403 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H1CP16403 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.88■□□□□ 0.61
HIST1H1CP16403 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H1CP16403 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.88■□□□□ 0.61
HIST1H1CP16403 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H1CP16403 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.88■□□□□ 0.61
HIST1H1CP16403 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HIST1H1CP16403 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.88■□□□□ 0.61
HIST1H1CP16403 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST1H1CP16403 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST1H1CP16403 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HIST1H1CP16403 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST1H1CP16403 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST1H1CP16403 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.87■□□□□ 0.61
HIST1H1CP16403 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST1H1CP16403 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.87■□□□□ 0.61
HIST1H1CP16403 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST1H1CP16403 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.87■□□□□ 0.61
HIST1H1CP16403 SLC25A24-204ENST00000569674 2357 ntBASIC18.87■□□□□ 0.61
HIST1H1CP16403 AC008764.7-201ENST00000593779 1081 ntBASIC18.87■□□□□ 0.61
HIST1H1CP16403 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HIST1H1CP16403 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HIST1H1CP16403 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HIST1H1CP16403 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.87■□□□□ 0.61
HIST1H1CP16403 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.86■□□□□ 0.61
HIST1H1CP16403 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H1CP16403 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H1CP16403 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H1CP16403 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.86■□□□□ 0.61
HIST1H1CP16403 AC009237.3-201ENST00000393279 1427 ntBASIC18.86■□□□□ 0.61
HIST1H1CP16403 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H1CP16403 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.86■□□□□ 0.61
HIST1H1CP16403 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
HIST1H1CP16403 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.86■□□□□ 0.61
HIST1H1CP16403 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.86■□□□□ 0.61
HIST1H1CP16403 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HIST1H1CP16403 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
HIST1H1CP16403 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H1CP16403 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST1H1CP16403 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST1H1CP16403 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST1H1CP16403 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms