Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTSBP07858 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTSBP07858 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTSBP07858 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTSBP07858 MIR663A-201ENST00000385250 93 ntBASIC20.08■□□□□ 0.81
CTSBP07858 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CTSBP07858 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.08■□□□□ 0.81
CTSBP07858 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CTSBP07858 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.08■□□□□ 0.81
CTSBP07858 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CTSBP07858 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.08■□□□□ 0.81
CTSBP07858 AC010536.3-201ENST00000620306 533 ntBASIC20.08■□□□□ 0.81
CTSBP07858 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CTSBP07858 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CTSBP07858 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CTSBP07858 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CTSBP07858 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CTSBP07858 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTSBP07858 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTSBP07858 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.07■□□□□ 0.8
CTSBP07858 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTSBP07858 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTSBP07858 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTSBP07858 HLA-L-209ENST00000420110 1011 ntBASIC20.07■□□□□ 0.8
CTSBP07858 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTSBP07858 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTSBP07858 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CTSBP07858 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTSBP07858 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTSBP07858 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CTSBP07858 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTSBP07858 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.06■□□□□ 0.8
CTSBP07858 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTSBP07858 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTSBP07858 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CTSBP07858 ID1-201ENST00000376105 1233 ntBASIC20.06■□□□□ 0.8
CTSBP07858 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.06■□□□□ 0.8
CTSBP07858 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
CTSBP07858 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.06■□□□□ 0.8
CTSBP07858 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.06■□□□□ 0.8
CTSBP07858 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.06■□□□□ 0.8
CTSBP07858 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.06■□□□□ 0.8
CTSBP07858 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CTSBP07858 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.06■□□□□ 0.8
CTSBP07858 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.06■□□□□ 0.8
CTSBP07858 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTSBP07858 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTSBP07858 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.05■□□□□ 0.8
CTSBP07858 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.05■□□□□ 0.8
CTSBP07858 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.05■□□□□ 0.8
CTSBP07858 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.05■□□□□ 0.8
CTSBP07858 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CTSBP07858 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CTSBP07858 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.05■□□□□ 0.8
CTSBP07858 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CTSBP07858 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTSBP07858 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.05■□□□□ 0.8
CTSBP07858 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.05■□□□□ 0.8
CTSBP07858 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CTSBP07858 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CTSBP07858 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
CTSBP07858 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTSBP07858 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTSBP07858 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTSBP07858 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.05■□□□□ 0.8
CTSBP07858 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTSBP07858 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.05■□□□□ 0.8
CTSBP07858 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
CTSBP07858 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CTSBP07858 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTSBP07858 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTSBP07858 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTSBP07858 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.04■□□□□ 0.8
CTSBP07858 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CTSBP07858 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.04■□□□□ 0.8
CTSBP07858 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.04■□□□□ 0.8
CTSBP07858 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTSBP07858 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.04■□□□□ 0.8
CTSBP07858 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.04■□□□□ 0.8
CTSBP07858 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.04■□□□□ 0.8
CTSBP07858 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.04■□□□□ 0.8
CTSBP07858 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.04■□□□□ 0.8
CTSBP07858 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.04■□□□□ 0.8
CTSBP07858 AC008175.2-201ENST00000612840 297 ntBASIC20.04■□□□□ 0.8
CTSBP07858 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CTSBP07858 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.04■□□□□ 0.8
CTSBP07858 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTSBP07858 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTSBP07858 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTSBP07858 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTSBP07858 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTSBP07858 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
CTSBP07858 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTSBP07858 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTSBP07858 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTSBP07858 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTSBP07858 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTSBP07858 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.03■□□□□ 0.8
CTSBP07858 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTSBP07858 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms