Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.09■■□□□ 1.29
TIMP1P01033 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TIMP1P01033 KRT17P3-201ENST00000420566 1262 ntBASIC23.09■■□□□ 1.29
TIMP1P01033 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TIMP1P01033 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TIMP1P01033 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.08■■□□□ 1.29
TIMP1P01033 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
TIMP1P01033 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.08■■□□□ 1.29
TIMP1P01033 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TIMP1P01033 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
TIMP1P01033 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TIMP1P01033 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC23.08■■□□□ 1.29
TIMP1P01033 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC23.08■■□□□ 1.29
TIMP1P01033 RN7SL471P-201ENST00000580476 299 ntBASIC23.08■■□□□ 1.29
TIMP1P01033 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23.08■■□□□ 1.29
TIMP1P01033 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.08■■□□□ 1.29
TIMP1P01033 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.08■■□□□ 1.29
TIMP1P01033 AC100791.3-201ENST00000617619 330 ntBASIC23.08■■□□□ 1.29
TIMP1P01033 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TIMP1P01033 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TIMP1P01033 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.08■■□□□ 1.28
TIMP1P01033 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
TIMP1P01033 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
TIMP1P01033 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.08■■□□□ 1.28
TIMP1P01033 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
TIMP1P01033 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
TIMP1P01033 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
TIMP1P01033 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TIMP1P01033 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.07■■□□□ 1.28
TIMP1P01033 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.07■■□□□ 1.28
TIMP1P01033 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC23.07■■□□□ 1.28
TIMP1P01033 FAM21FP-204ENST00000608637 956 ntBASIC23.07■■□□□ 1.28
TIMP1P01033 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC23.07■■□□□ 1.28
TIMP1P01033 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.07■■□□□ 1.28
TIMP1P01033 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TIMP1P01033 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
TIMP1P01033 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.06■■□□□ 1.28
TIMP1P01033 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
TIMP1P01033 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
TIMP1P01033 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TIMP1P01033 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.06■■□□□ 1.28
TIMP1P01033 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
TIMP1P01033 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
TIMP1P01033 SNORA78-201ENST00000459373 127 ntBASIC23.06■■□□□ 1.28
TIMP1P01033 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TIMP1P01033 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.06■■□□□ 1.28
TIMP1P01033 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.06■■□□□ 1.28
TIMP1P01033 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TIMP1P01033 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TIMP1P01033 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TIMP1P01033 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TIMP1P01033 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TIMP1P01033 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
TIMP1P01033 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.06■■□□□ 1.28
TIMP1P01033 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TIMP1P01033 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TIMP1P01033 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
TIMP1P01033 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.05■■□□□ 1.28
TIMP1P01033 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
TIMP1P01033 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TIMP1P01033 PNMA6B-201ENST00000538162 1200 ntBASIC23.05■■□□□ 1.28
TIMP1P01033 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
TIMP1P01033 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
TIMP1P01033 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TIMP1P01033 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TIMP1P01033 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.04■■□□□ 1.28
TIMP1P01033 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TIMP1P01033 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.04■■□□□ 1.28
TIMP1P01033 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TIMP1P01033 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TIMP1P01033 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
TIMP1P01033 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TIMP1P01033 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.03■■□□□ 1.28
TIMP1P01033 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TIMP1P01033 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TIMP1P01033 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC23.03■■□□□ 1.28
TIMP1P01033 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TIMP1P01033 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
TIMP1P01033 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
TIMP1P01033 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TIMP1P01033 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.03■■□□□ 1.28
TIMP1P01033 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TIMP1P01033 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TIMP1P01033 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TIMP1P01033 LINC01023-201ENST00000606054 436 ntBASIC23.02■■□□□ 1.28
TIMP1P01033 AC010331.1-201ENST00000611423 582 ntBASIC23.02■■□□□ 1.28
TIMP1P01033 AL589743.5-201ENST00000616611 1050 ntBASIC23.02■■□□□ 1.28
TIMP1P01033 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TIMP1P01033 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
TIMP1P01033 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TIMP1P01033 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TIMP1P01033 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TIMP1P01033 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TIMP1P01033 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
TIMP1P01033 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TIMP1P01033 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.01■■□□□ 1.27
TIMP1P01033 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.01■■□□□ 1.27
TIMP1P01033 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TIMP1P01033 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC23.01■■□□□ 1.27
TIMP1P01033 AC091799.1-201ENST00000422823 811 ntBASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms