Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
LTN1O94822 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
LTN1O94822 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC28.27■■■□□ 2.12
LTN1O94822 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
LTN1O94822 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC28.27■■■□□ 2.12
LTN1O94822 AL591742.1-201ENST00000604433 565 ntBASIC28.27■■■□□ 2.12
LTN1O94822 AC026471.6-201ENST00000622954 1905 ntBASIC28.26■■■□□ 2.11
LTN1O94822 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC28.26■■■□□ 2.11
LTN1O94822 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC28.26■■■□□ 2.11
LTN1O94822 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
LTN1O94822 BET1L-207ENST00000529614 560 ntTSL 5 BASIC28.26■■■□□ 2.11
LTN1O94822 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC28.26■■■□□ 2.11
LTN1O94822 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC28.26■■■□□ 2.11
LTN1O94822 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC28.26■■■□□ 2.11
LTN1O94822 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
LTN1O94822 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
LTN1O94822 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
LTN1O94822 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
LTN1O94822 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC28.25■■■□□ 2.11
LTN1O94822 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC28.25■■■□□ 2.11
LTN1O94822 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC28.25■■■□□ 2.11
LTN1O94822 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
LTN1O94822 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
LTN1O94822 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
LTN1O94822 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC28.25■■■□□ 2.11
LTN1O94822 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
LTN1O94822 AP003097.1-201ENST00000530657 1135 ntBASIC28.25■■■□□ 2.11
LTN1O94822 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
LTN1O94822 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
LTN1O94822 AC127496.7-201ENST00000625110 1798 ntBASIC28.25■■■□□ 2.11
LTN1O94822 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
LTN1O94822 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC28.25■■■□□ 2.11
LTN1O94822 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
LTN1O94822 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
LTN1O94822 IRX5-204ENST00000560154 879 ntTSL 5 BASIC28.24■■■□□ 2.11
LTN1O94822 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC28.24■■■□□ 2.11
LTN1O94822 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
LTN1O94822 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
LTN1O94822 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
LTN1O94822 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
LTN1O94822 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
LTN1O94822 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC28.24■■■□□ 2.11
LTN1O94822 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC28.24■■■□□ 2.11
LTN1O94822 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC28.24■■■□□ 2.11
LTN1O94822 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC28.24■■■□□ 2.11
LTN1O94822 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC28.24■■■□□ 2.11
LTN1O94822 PKM-204ENST00000449901 2526 ntTSL 2 BASIC28.23■■■□□ 2.11
LTN1O94822 C11orf96-202ENST00000528572 1834 ntBASIC28.23■■■□□ 2.11
LTN1O94822 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
LTN1O94822 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
LTN1O94822 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC28.23■■■□□ 2.11
LTN1O94822 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC28.23■■■□□ 2.11
LTN1O94822 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC28.23■■■□□ 2.11
LTN1O94822 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC28.23■■■□□ 2.11
LTN1O94822 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC28.23■■■□□ 2.11
LTN1O94822 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
LTN1O94822 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
LTN1O94822 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC28.22■■■□□ 2.11
LTN1O94822 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
LTN1O94822 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
LTN1O94822 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC28.22■■■□□ 2.11
LTN1O94822 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
LTN1O94822 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC28.22■■■□□ 2.11
LTN1O94822 OR2A1-AS1-201ENST00000462305 773 ntBASIC28.22■■■□□ 2.11
LTN1O94822 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC28.22■■■□□ 2.11
LTN1O94822 PBX1-209ENST00000485769 834 ntTSL 2 BASIC28.22■■■□□ 2.11
LTN1O94822 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC28.22■■■□□ 2.11
LTN1O94822 AC006058.3-201ENST00000606217 1069 ntBASIC28.22■■■□□ 2.11
LTN1O94822 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
LTN1O94822 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
LTN1O94822 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
LTN1O94822 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
LTN1O94822 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC28.22■■■□□ 2.11
LTN1O94822 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
LTN1O94822 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
LTN1O94822 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
LTN1O94822 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC28.21■■■□□ 2.11
LTN1O94822 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
LTN1O94822 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC28.21■■■□□ 2.11
LTN1O94822 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC28.21■■■□□ 2.11
LTN1O94822 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.11
LTN1O94822 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC28.2■■■□□ 2.11
LTN1O94822 AC008403.3-201ENST00000598924 454 ntBASIC28.2■■■□□ 2.11
LTN1O94822 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
LTN1O94822 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC28.2■■■□□ 2.1
LTN1O94822 FAM99A-202ENST00000538190 1989 ntBASIC28.19■■■□□ 2.1
LTN1O94822 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
LTN1O94822 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC28.19■■■□□ 2.1
LTN1O94822 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
LTN1O94822 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
LTN1O94822 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
LTN1O94822 AC060766.5-201ENST00000590539 871 ntBASIC28.19■■■□□ 2.1
LTN1O94822 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
LTN1O94822 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
LTN1O94822 GATS-209ENST00000454084 1030 ntTSL 3 BASIC28.18■■■□□ 2.1
LTN1O94822 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
LTN1O94822 AC080038.3-201ENST00000623346 1952 ntBASIC28.18■■■□□ 2.1
LTN1O94822 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
LTN1O94822 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
LTN1O94822 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC28.17■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms