Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.25■■□□□ 1.15
BEST1O76090 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.25■■□□□ 1.15
BEST1O76090 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
BEST1O76090 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
BEST1O76090 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.25■■□□□ 1.15
BEST1O76090 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.25■■□□□ 1.15
BEST1O76090 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
BEST1O76090 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
BEST1O76090 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
BEST1O76090 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.24■■□□□ 1.15
BEST1O76090 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
BEST1O76090 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
BEST1O76090 CDCA4P2-201ENST00000441182 718 ntBASIC22.24■■□□□ 1.15
BEST1O76090 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
BEST1O76090 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.24■■□□□ 1.15
BEST1O76090 AC090192.1-201ENST00000517740 490 ntBASIC22.24■■□□□ 1.15
BEST1O76090 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
BEST1O76090 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
BEST1O76090 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.24■■□□□ 1.15
BEST1O76090 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
BEST1O76090 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.24■■□□□ 1.15
BEST1O76090 AC073111.5-205ENST00000641717 521 ntBASIC22.24■■□□□ 1.15
BEST1O76090 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
BEST1O76090 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
BEST1O76090 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.24■■□□□ 1.15
BEST1O76090 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.23■■□□□ 1.15
BEST1O76090 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
BEST1O76090 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
BEST1O76090 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.23■■□□□ 1.15
BEST1O76090 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.23■■□□□ 1.15
BEST1O76090 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.23■■□□□ 1.15
BEST1O76090 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
BEST1O76090 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
BEST1O76090 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
BEST1O76090 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.23■■□□□ 1.15
BEST1O76090 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.23■■□□□ 1.15
BEST1O76090 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
BEST1O76090 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.23■■□□□ 1.15
BEST1O76090 RAP2CP1-201ENST00000605103 478 ntBASIC22.23■■□□□ 1.15
BEST1O76090 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
BEST1O76090 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.23■■□□□ 1.15
BEST1O76090 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.22■■□□□ 1.15
BEST1O76090 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.22■■□□□ 1.15
BEST1O76090 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
BEST1O76090 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
BEST1O76090 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
BEST1O76090 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
BEST1O76090 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
BEST1O76090 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.22■■□□□ 1.15
BEST1O76090 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.22■■□□□ 1.15
BEST1O76090 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
BEST1O76090 AC008175.2-201ENST00000612840 297 ntBASIC22.22■■□□□ 1.15
BEST1O76090 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.22■■□□□ 1.15
BEST1O76090 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
BEST1O76090 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.22■■□□□ 1.15
BEST1O76090 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
BEST1O76090 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
BEST1O76090 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
BEST1O76090 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
BEST1O76090 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
BEST1O76090 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.21■■□□□ 1.15
BEST1O76090 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
BEST1O76090 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
BEST1O76090 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.21■■□□□ 1.15
BEST1O76090 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
BEST1O76090 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
BEST1O76090 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
BEST1O76090 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
BEST1O76090 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
BEST1O76090 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.21■■□□□ 1.15
BEST1O76090 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
BEST1O76090 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.2■■□□□ 1.14
BEST1O76090 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
BEST1O76090 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
BEST1O76090 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
BEST1O76090 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
BEST1O76090 POU5F1P4-201ENST00000413175 1085 ntBASIC22.2■■□□□ 1.14
BEST1O76090 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
BEST1O76090 DUX4L16-201ENST00000555130 1264 ntBASIC22.2■■□□□ 1.14
BEST1O76090 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
BEST1O76090 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
BEST1O76090 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.2■■□□□ 1.14
BEST1O76090 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
BEST1O76090 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.2■■□□□ 1.14
BEST1O76090 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
BEST1O76090 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
BEST1O76090 LINC00565-201ENST00000562710 2331 ntBASIC22.2■■□□□ 1.14
BEST1O76090 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
BEST1O76090 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
BEST1O76090 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
BEST1O76090 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
BEST1O76090 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.19■■□□□ 1.14
BEST1O76090 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
BEST1O76090 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
BEST1O76090 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.19■■□□□ 1.14
BEST1O76090 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.19■■□□□ 1.14
BEST1O76090 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.19■■□□□ 1.14
BEST1O76090 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
BEST1O76090 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
BEST1O76090 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms