Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNRNP200O75643 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.27■□□□□ 0.84
SNRNP200O75643 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNRNP200O75643 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SNRNP200O75643 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.27■□□□□ 0.84
SNRNP200O75643 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.27■□□□□ 0.84
SNRNP200O75643 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.27■□□□□ 0.84
SNRNP200O75643 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNRNP200O75643 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SNRNP200O75643 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNRNP200O75643 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNRNP200O75643 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SNRNP200O75643 KRT16P2-201ENST00000414673 1423 ntBASIC20.27■□□□□ 0.84
SNRNP200O75643 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.27■□□□□ 0.84
SNRNP200O75643 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SNRNP200O75643 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNRNP200O75643 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNRNP200O75643 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNRNP200O75643 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
SNRNP200O75643 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
SNRNP200O75643 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SNRNP200O75643 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.26■□□□□ 0.83
SNRNP200O75643 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.26■□□□□ 0.83
SNRNP200O75643 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.26■□□□□ 0.83
SNRNP200O75643 AC073111.5-205ENST00000641717 521 ntBASIC20.26■□□□□ 0.83
SNRNP200O75643 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
SNRNP200O75643 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SNRNP200O75643 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SNRNP200O75643 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SNRNP200O75643 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNRNP200O75643 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNRNP200O75643 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SNRNP200O75643 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SNRNP200O75643 CDCA4P2-201ENST00000441182 718 ntBASIC20.26■□□□□ 0.83
SNRNP200O75643 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.26■□□□□ 0.83
SNRNP200O75643 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.26■□□□□ 0.83
SNRNP200O75643 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.26■□□□□ 0.83
SNRNP200O75643 AP001160.3-201ENST00000601484 763 ntBASIC20.26■□□□□ 0.83
SNRNP200O75643 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNRNP200O75643 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNRNP200O75643 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.25■□□□□ 0.83
SNRNP200O75643 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNRNP200O75643 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.25■□□□□ 0.83
SNRNP200O75643 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.25■□□□□ 0.83
SNRNP200O75643 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNRNP200O75643 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNRNP200O75643 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNRNP200O75643 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
SNRNP200O75643 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SNRNP200O75643 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.24■□□□□ 0.83
SNRNP200O75643 AC026185.1-201ENST00000445748 174 ntBASIC20.24■□□□□ 0.83
SNRNP200O75643 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNRNP200O75643 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SNRNP200O75643 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.24■□□□□ 0.83
SNRNP200O75643 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
SNRNP200O75643 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNRNP200O75643 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SNRNP200O75643 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNRNP200O75643 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNRNP200O75643 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNRNP200O75643 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.24■□□□□ 0.83
SNRNP200O75643 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.24■□□□□ 0.83
SNRNP200O75643 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SNRNP200O75643 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.24■□□□□ 0.83
SNRNP200O75643 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.24■□□□□ 0.83
SNRNP200O75643 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNRNP200O75643 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNRNP200O75643 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.24■□□□□ 0.83
SNRNP200O75643 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.23■□□□□ 0.83
SNRNP200O75643 POU5F1P4-201ENST00000413175 1085 ntBASIC20.23■□□□□ 0.83
SNRNP200O75643 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.23■□□□□ 0.83
SNRNP200O75643 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.23■□□□□ 0.83
SNRNP200O75643 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.23■□□□□ 0.83
SNRNP200O75643 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SNRNP200O75643 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
SNRNP200O75643 BID-214ENST00000617586 542 ntTSL 5 BASIC20.23■□□□□ 0.83
SNRNP200O75643 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.23■□□□□ 0.83
SNRNP200O75643 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.23■□□□□ 0.83
SNRNP200O75643 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNRNP200O75643 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
SNRNP200O75643 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.23■□□□□ 0.83
SNRNP200O75643 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SNRNP200O75643 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.23■□□□□ 0.83
SNRNP200O75643 AC053503.5-201ENST00000601508 636 ntBASIC20.23■□□□□ 0.83
SNRNP200O75643 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNRNP200O75643 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.22■□□□□ 0.83
SNRNP200O75643 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNRNP200O75643 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SNRNP200O75643 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SNRNP200O75643 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SNRNP200O75643 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.22■□□□□ 0.83
SNRNP200O75643 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
SNRNP200O75643 AC008175.2-201ENST00000612840 297 ntBASIC20.22■□□□□ 0.83
SNRNP200O75643 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNRNP200O75643 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SNRNP200O75643 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.22■□□□□ 0.83
SNRNP200O75643 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.21■□□□□ 0.83
SNRNP200O75643 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.21■□□□□ 0.83
SNRNP200O75643 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNRNP200O75643 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms