Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDCD6O75340 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PDCD6O75340 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PDCD6O75340 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDCD6O75340 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDCD6O75340 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDCD6O75340 AL136116.3-201ENST00000402907 1138 ntBASIC17.78■□□□□ 0.44
PDCD6O75340 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.78■□□□□ 0.44
PDCD6O75340 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.78■□□□□ 0.44
PDCD6O75340 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDCD6O75340 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDCD6O75340 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PDCD6O75340 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDCD6O75340 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PDCD6O75340 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDCD6O75340 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PDCD6O75340 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDCD6O75340 AL157384.1-201ENST00000445995 2473 ntBASIC17.77■□□□□ 0.44
PDCD6O75340 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.77■□□□□ 0.44
PDCD6O75340 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDCD6O75340 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
PDCD6O75340 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDCD6O75340 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PDCD6O75340 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDCD6O75340 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDCD6O75340 AC133561.4-201ENST00000566112 224 ntBASIC17.77■□□□□ 0.44
PDCD6O75340 MIR4767-201ENST00000582827 78 ntBASIC17.77■□□□□ 0.44
PDCD6O75340 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDCD6O75340 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PDCD6O75340 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDCD6O75340 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.77■□□□□ 0.43
PDCD6O75340 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PDCD6O75340 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDCD6O75340 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDCD6O75340 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDCD6O75340 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PDCD6O75340 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDCD6O75340 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.76■□□□□ 0.43
PDCD6O75340 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDCD6O75340 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDCD6O75340 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDCD6O75340 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDCD6O75340 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDCD6O75340 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.76■□□□□ 0.43
PDCD6O75340 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDCD6O75340 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDCD6O75340 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDCD6O75340 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDCD6O75340 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
PDCD6O75340 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.76■□□□□ 0.43
PDCD6O75340 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDCD6O75340 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.76■□□□□ 0.43
PDCD6O75340 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.76■□□□□ 0.43
PDCD6O75340 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDCD6O75340 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.76■□□□□ 0.43
PDCD6O75340 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PDCD6O75340 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDCD6O75340 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDCD6O75340 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDCD6O75340 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDCD6O75340 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDCD6O75340 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDCD6O75340 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDCD6O75340 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDCD6O75340 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
PDCD6O75340 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.75■□□□□ 0.43
PDCD6O75340 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDCD6O75340 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDCD6O75340 AC233992.3-201ENST00000607491 485 ntBASIC17.75■□□□□ 0.43
PDCD6O75340 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDCD6O75340 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDCD6O75340 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PDCD6O75340 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.75■□□□□ 0.43
PDCD6O75340 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDCD6O75340 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDCD6O75340 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDCD6O75340 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.74■□□□□ 0.43
PDCD6O75340 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDCD6O75340 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDCD6O75340 AC073130.3-201ENST00000624389 2278 ntBASIC17.74■□□□□ 0.43
PDCD6O75340 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDCD6O75340 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.74■□□□□ 0.43
PDCD6O75340 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.74■□□□□ 0.43
PDCD6O75340 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDCD6O75340 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.74■□□□□ 0.43
PDCD6O75340 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDCD6O75340 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PDCD6O75340 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.74■□□□□ 0.43
PDCD6O75340 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PDCD6O75340 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.74■□□□□ 0.43
PDCD6O75340 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDCD6O75340 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PDCD6O75340 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDCD6O75340 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDCD6O75340 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.74■□□□□ 0.43
PDCD6O75340 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.74■□□□□ 0.43
PDCD6O75340 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDCD6O75340 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PDCD6O75340 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PDCD6O75340 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms