Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.92■■□□□ 1.1
OPHN1O60890 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
OPHN1O60890 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
OPHN1O60890 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
OPHN1O60890 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
OPHN1O60890 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
OPHN1O60890 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
OPHN1O60890 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
OPHN1O60890 AC016769.1-201ENST00000409132 1010 ntBASIC21.92■■□□□ 1.1
OPHN1O60890 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.92■■□□□ 1.1
OPHN1O60890 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.92■■□□□ 1.1
OPHN1O60890 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
OPHN1O60890 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
OPHN1O60890 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
OPHN1O60890 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
OPHN1O60890 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
OPHN1O60890 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
OPHN1O60890 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
OPHN1O60890 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
OPHN1O60890 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
OPHN1O60890 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.91■■□□□ 1.1
OPHN1O60890 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
OPHN1O60890 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
OPHN1O60890 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
OPHN1O60890 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
OPHN1O60890 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.91■■□□□ 1.1
OPHN1O60890 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
OPHN1O60890 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
OPHN1O60890 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
OPHN1O60890 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
OPHN1O60890 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.91■■□□□ 1.1
OPHN1O60890 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
OPHN1O60890 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
OPHN1O60890 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
OPHN1O60890 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
OPHN1O60890 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.9■■□□□ 1.1
OPHN1O60890 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
OPHN1O60890 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.9■■□□□ 1.1
OPHN1O60890 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
OPHN1O60890 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.9■■□□□ 1.1
OPHN1O60890 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.9■■□□□ 1.1
OPHN1O60890 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
OPHN1O60890 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
OPHN1O60890 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
OPHN1O60890 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
OPHN1O60890 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
OPHN1O60890 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.9■■□□□ 1.1
OPHN1O60890 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
OPHN1O60890 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
OPHN1O60890 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
OPHN1O60890 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.9■■□□□ 1.1
OPHN1O60890 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
OPHN1O60890 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.89■■□□□ 1.1
OPHN1O60890 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.89■■□□□ 1.1
OPHN1O60890 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
OPHN1O60890 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
OPHN1O60890 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
OPHN1O60890 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
OPHN1O60890 AC026471.6-201ENST00000622954 1905 ntBASIC21.89■■□□□ 1.09
OPHN1O60890 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.89■■□□□ 1.09
OPHN1O60890 AC105233.4-201ENST00000642045 216 ntBASIC21.89■■□□□ 1.09
OPHN1O60890 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
OPHN1O60890 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.89■■□□□ 1.09
OPHN1O60890 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.89■■□□□ 1.09
OPHN1O60890 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
OPHN1O60890 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
OPHN1O60890 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
OPHN1O60890 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
OPHN1O60890 SLC25A24-204ENST00000569674 2357 ntBASIC21.89■■□□□ 1.09
OPHN1O60890 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
OPHN1O60890 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.89■■□□□ 1.09
OPHN1O60890 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.89■■□□□ 1.09
OPHN1O60890 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
OPHN1O60890 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.89■■□□□ 1.09
OPHN1O60890 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
OPHN1O60890 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
OPHN1O60890 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.88■■□□□ 1.09
OPHN1O60890 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.88■■□□□ 1.09
OPHN1O60890 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
OPHN1O60890 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
OPHN1O60890 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
OPHN1O60890 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.88■■□□□ 1.09
OPHN1O60890 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.88■■□□□ 1.09
OPHN1O60890 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
OPHN1O60890 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.88■■□□□ 1.09
OPHN1O60890 AC137761.2-201ENST00000561729 223 ntBASIC21.88■■□□□ 1.09
OPHN1O60890 AC145350.3-201ENST00000569033 163 ntBASIC21.88■■□□□ 1.09
OPHN1O60890 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.88■■□□□ 1.09
OPHN1O60890 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.88■■□□□ 1.09
OPHN1O60890 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
OPHN1O60890 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
OPHN1O60890 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.88■■□□□ 1.09
OPHN1O60890 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
OPHN1O60890 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
OPHN1O60890 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
OPHN1O60890 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.87■■□□□ 1.09
OPHN1O60890 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
OPHN1O60890 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.87■■□□□ 1.09
OPHN1O60890 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
OPHN1O60890 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms