Protein–RNA interactions for Protein: O60504

SORBS3, Vinexin, humanhuman

Predictions only

Length 671 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3O60504 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SORBS3O60504 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SORBS3O60504 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SORBS3O60504 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SORBS3O60504 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SORBS3O60504 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SORBS3O60504 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SORBS3O60504 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SORBS3O60504 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
SORBS3O60504 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.78■■□□□ 1.4
SORBS3O60504 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.78■■□□□ 1.4
SORBS3O60504 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.78■■□□□ 1.4
SORBS3O60504 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.78■■□□□ 1.4
SORBS3O60504 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
SORBS3O60504 AC008175.2-201ENST00000612840 297 ntBASIC23.78■■□□□ 1.4
SORBS3O60504 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SORBS3O60504 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SORBS3O60504 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SORBS3O60504 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SORBS3O60504 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SORBS3O60504 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SORBS3O60504 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SORBS3O60504 AC068338.2-201ENST00000563278 1430 ntBASIC23.77■■□□□ 1.4
SORBS3O60504 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.77■■□□□ 1.4
SORBS3O60504 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
SORBS3O60504 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.77■■□□□ 1.4
SORBS3O60504 CYP2T1P-201ENST00000432607 1285 ntBASIC23.77■■□□□ 1.4
SORBS3O60504 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.77■■□□□ 1.4
SORBS3O60504 AF201337.1-201ENST00000520239 748 ntBASIC23.77■■□□□ 1.4
SORBS3O60504 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.77■■□□□ 1.4
SORBS3O60504 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SORBS3O60504 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.77■■□□□ 1.4
SORBS3O60504 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.77■■□□□ 1.4
SORBS3O60504 FAM99A-202ENST00000538190 1989 ntBASIC23.77■■□□□ 1.4
SORBS3O60504 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.77■■□□□ 1.4
SORBS3O60504 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.77■■□□□ 1.4
SORBS3O60504 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SORBS3O60504 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SORBS3O60504 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.76■■□□□ 1.39
SORBS3O60504 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SORBS3O60504 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
SORBS3O60504 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
SORBS3O60504 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SORBS3O60504 SLC29A4P1-201ENST00000398760 971 ntBASIC23.76■■□□□ 1.39
SORBS3O60504 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.76■■□□□ 1.39
SORBS3O60504 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.76■■□□□ 1.39
SORBS3O60504 AC013268.1-206ENST00000638368 961 ntBASIC23.76■■□□□ 1.39
SORBS3O60504 AC112229.1-201ENST00000639295 961 ntBASIC23.76■■□□□ 1.39
SORBS3O60504 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SORBS3O60504 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SORBS3O60504 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.76■■□□□ 1.39
SORBS3O60504 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SORBS3O60504 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.75■■□□□ 1.39
SORBS3O60504 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SORBS3O60504 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SORBS3O60504 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SORBS3O60504 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SORBS3O60504 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.75■■□□□ 1.39
SORBS3O60504 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.75■■□□□ 1.39
SORBS3O60504 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.75■■□□□ 1.39
SORBS3O60504 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
SORBS3O60504 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.75■■□□□ 1.39
SORBS3O60504 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.75■■□□□ 1.39
SORBS3O60504 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SORBS3O60504 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.75■■□□□ 1.39
SORBS3O60504 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.75■■□□□ 1.39
SORBS3O60504 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.74■■□□□ 1.39
SORBS3O60504 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SORBS3O60504 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.74■■□□□ 1.39
SORBS3O60504 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SORBS3O60504 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SORBS3O60504 AC093787.1-201ENST00000450396 207 ntBASIC23.74■■□□□ 1.39
SORBS3O60504 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
SORBS3O60504 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.74■■□□□ 1.39
SORBS3O60504 AC120498.10-201ENST00000621827 505 ntBASIC23.74■■□□□ 1.39
SORBS3O60504 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.74■■□□□ 1.39
SORBS3O60504 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
SORBS3O60504 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.74■■□□□ 1.39
SORBS3O60504 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SORBS3O60504 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
SORBS3O60504 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
SORBS3O60504 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SORBS3O60504 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.74■■□□□ 1.39
SORBS3O60504 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.73■■□□□ 1.39
SORBS3O60504 AC079834.2-201ENST00000609776 1949 ntBASIC23.73■■□□□ 1.39
SORBS3O60504 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SORBS3O60504 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SORBS3O60504 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
SORBS3O60504 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SORBS3O60504 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.73■■□□□ 1.39
SORBS3O60504 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.73■■□□□ 1.39
SORBS3O60504 AC142086.2-201ENST00000569753 217 ntBASIC23.73■■□□□ 1.39
SORBS3O60504 AC016405.3-201ENST00000607710 860 ntBASIC23.73■■□□□ 1.39
SORBS3O60504 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.73■■□□□ 1.39
SORBS3O60504 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SORBS3O60504 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
SORBS3O60504 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
SORBS3O60504 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.72■■□□□ 1.39
SORBS3O60504 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.72■■□□□ 1.39
SORBS3O60504 SLC7A5P1-201ENST00000568957 537 ntBASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms