Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC026185.1-201ENST00000445748 174 ntBASIC21.39■■□□□ 1.01
SMAD6O43541 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SMAD6O43541 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SMAD6O43541 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.39■■□□□ 1.01
SMAD6O43541 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.39■■□□□ 1.01
SMAD6O43541 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.39■■□□□ 1.01
SMAD6O43541 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SMAD6O43541 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SMAD6O43541 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
SMAD6O43541 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.39■■□□□ 1.01
SMAD6O43541 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SMAD6O43541 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.39■■□□□ 1.01
SMAD6O43541 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.39■■□□□ 1.01
SMAD6O43541 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SMAD6O43541 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SMAD6O43541 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SMAD6O43541 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMAD6O43541 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.38■■□□□ 1.01
SMAD6O43541 CROCCP5-201ENST00000436658 830 ntBASIC21.38■■□□□ 1.01
SMAD6O43541 SLC7A5P1-201ENST00000568957 537 ntBASIC21.38■■□□□ 1.01
SMAD6O43541 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.38■■□□□ 1.01
SMAD6O43541 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMAD6O43541 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
SMAD6O43541 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.38■■□□□ 1.01
SMAD6O43541 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMAD6O43541 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMAD6O43541 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SMAD6O43541 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
SMAD6O43541 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
SMAD6O43541 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMAD6O43541 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMAD6O43541 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.37■■□□□ 1.01
SMAD6O43541 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMAD6O43541 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.37■■□□□ 1.01
SMAD6O43541 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.37■■□□□ 1.01
SMAD6O43541 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.37■■□□□ 1.01
SMAD6O43541 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.37■■□□□ 1.01
SMAD6O43541 AC010536.3-201ENST00000620306 533 ntBASIC21.37■■□□□ 1.01
SMAD6O43541 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SMAD6O43541 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.37■■□□□ 1.01
SMAD6O43541 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMAD6O43541 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SMAD6O43541 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.37■■□□□ 1.01
SMAD6O43541 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.37■■□□□ 1.01
SMAD6O43541 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
SMAD6O43541 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.37■■□□□ 1.01
SMAD6O43541 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SMAD6O43541 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMAD6O43541 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMAD6O43541 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.36■■□□□ 1.01
SMAD6O43541 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SMAD6O43541 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
SMAD6O43541 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMAD6O43541 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.36■■□□□ 1.01
SMAD6O43541 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.36■■□□□ 1.01
SMAD6O43541 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.36■■□□□ 1.01
SMAD6O43541 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SMAD6O43541 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
SMAD6O43541 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.36■■□□□ 1.01
SMAD6O43541 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMAD6O43541 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.36■■□□□ 1.01
SMAD6O43541 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
SMAD6O43541 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMAD6O43541 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SMAD6O43541 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.36■■□□□ 1.01
SMAD6O43541 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.36■■□□□ 1.01
SMAD6O43541 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.36■■□□□ 1.01
SMAD6O43541 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.36■■□□□ 1.01
SMAD6O43541 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SMAD6O43541 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMAD6O43541 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMAD6O43541 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SMAD6O43541 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.35■■□□□ 1.01
SMAD6O43541 CNN2P6-201ENST00000439038 900 ntBASIC21.35■■□□□ 1.01
SMAD6O43541 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.35■■□□□ 1.01
SMAD6O43541 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.35■■□□□ 1.01
SMAD6O43541 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SMAD6O43541 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SMAD6O43541 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.35■■□□□ 1.01
SMAD6O43541 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.35■■□□□ 1.01
SMAD6O43541 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SMAD6O43541 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.35■■□□□ 1.01
SMAD6O43541 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SMAD6O43541 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.34■■□□□ 1.01
SMAD6O43541 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SMAD6O43541 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SMAD6O43541 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMAD6O43541 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMAD6O43541 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMAD6O43541 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.34■■□□□ 1.01
SMAD6O43541 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.34■■□□□ 1.01
SMAD6O43541 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.34■■□□□ 1.01
SMAD6O43541 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SMAD6O43541 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.34■■□□□ 1.01
SMAD6O43541 AC120498.10-201ENST00000621827 505 ntBASIC21.34■■□□□ 1.01
SMAD6O43541 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
SMAD6O43541 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SMAD6O43541 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SMAD6O43541 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.34■■□□□ 1.01
SMAD6O43541 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms