Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.76■■□□□ 1.07
SRRM3A6NNA2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
SRRM3A6NNA2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRRM3A6NNA2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.75■■□□□ 1.07
SRRM3A6NNA2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.75■■□□□ 1.07
SRRM3A6NNA2 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.75■■□□□ 1.07
SRRM3A6NNA2 BX842568.3-201ENST00000418104 571 ntBASIC21.75■■□□□ 1.07
SRRM3A6NNA2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.75■■□□□ 1.07
SRRM3A6NNA2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.75■■□□□ 1.07
SRRM3A6NNA2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRRM3A6NNA2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SRRM3A6NNA2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRRM3A6NNA2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRRM3A6NNA2 AC005703.6-201ENST00000623265 1329 ntBASIC21.75■■□□□ 1.07
SRRM3A6NNA2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.75■■□□□ 1.07
SRRM3A6NNA2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.75■■□□□ 1.07
SRRM3A6NNA2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SRRM3A6NNA2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SRRM3A6NNA2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SRRM3A6NNA2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SRRM3A6NNA2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRRM3A6NNA2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SRRM3A6NNA2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRRM3A6NNA2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SRRM3A6NNA2 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.74■■□□□ 1.07
SRRM3A6NNA2 AC027612.3-201ENST00000413684 1047 ntBASIC21.74■■□□□ 1.07
SRRM3A6NNA2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.74■■□□□ 1.07
SRRM3A6NNA2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.74■■□□□ 1.07
SRRM3A6NNA2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.74■■□□□ 1.07
SRRM3A6NNA2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.74■■□□□ 1.07
SRRM3A6NNA2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.74■■□□□ 1.07
SRRM3A6NNA2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SRRM3A6NNA2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SRRM3A6NNA2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SRRM3A6NNA2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SRRM3A6NNA2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SRRM3A6NNA2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SRRM3A6NNA2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SRRM3A6NNA2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.73■■□□□ 1.07
SRRM3A6NNA2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRRM3A6NNA2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SRRM3A6NNA2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRRM3A6NNA2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SRRM3A6NNA2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SRRM3A6NNA2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.73■■□□□ 1.07
SRRM3A6NNA2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.73■■□□□ 1.07
SRRM3A6NNA2 AC080038.1-201ENST00000611274 1154 ntBASIC21.73■■□□□ 1.07
SRRM3A6NNA2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
SRRM3A6NNA2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRRM3A6NNA2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRRM3A6NNA2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.73■■□□□ 1.07
SRRM3A6NNA2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.73■■□□□ 1.07
SRRM3A6NNA2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRRM3A6NNA2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SRRM3A6NNA2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.73■■□□□ 1.07
SRRM3A6NNA2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SRRM3A6NNA2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
SRRM3A6NNA2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRRM3A6NNA2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRRM3A6NNA2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SRRM3A6NNA2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SRRM3A6NNA2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRRM3A6NNA2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRRM3A6NNA2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRRM3A6NNA2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SRRM3A6NNA2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SRRM3A6NNA2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.72■■□□□ 1.07
SRRM3A6NNA2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.72■■□□□ 1.07
SRRM3A6NNA2 AC104771.1-201ENST00000603335 964 ntBASIC21.72■■□□□ 1.07
SRRM3A6NNA2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRRM3A6NNA2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRRM3A6NNA2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRRM3A6NNA2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRRM3A6NNA2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SRRM3A6NNA2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.72■■□□□ 1.07
SRRM3A6NNA2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SRRM3A6NNA2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.71■■□□□ 1.07
SRRM3A6NNA2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SRRM3A6NNA2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SRRM3A6NNA2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.71■■□□□ 1.07
SRRM3A6NNA2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SRRM3A6NNA2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SRRM3A6NNA2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SRRM3A6NNA2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SRRM3A6NNA2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SRRM3A6NNA2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SRRM3A6NNA2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.71■■□□□ 1.07
SRRM3A6NNA2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.7■■□□□ 1.07
SRRM3A6NNA2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.7■■□□□ 1.06
SRRM3A6NNA2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SRRM3A6NNA2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SRRM3A6NNA2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.7■■□□□ 1.06
SRRM3A6NNA2 CCDC92B-201ENST00000575506 885 ntBASIC21.7■■□□□ 1.06
SRRM3A6NNA2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SRRM3A6NNA2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SRRM3A6NNA2 LINC01960-201ENST00000563759 1884 ntBASIC21.7■■□□□ 1.06
SRRM3A6NNA2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.7■■□□□ 1.06
SRRM3A6NNA2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.7■■□□□ 1.06
SRRM3A6NNA2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SRRM3A6NNA2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms