Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRABD2BA6NFA1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TRABD2BA6NFA1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRABD2BA6NFA1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.29■□□□□ 0.84
TRABD2BA6NFA1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRABD2BA6NFA1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRABD2BA6NFA1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.28■□□□□ 0.84
TRABD2BA6NFA1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRABD2BA6NFA1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRABD2BA6NFA1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
TRABD2BA6NFA1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRABD2BA6NFA1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRABD2BA6NFA1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRABD2BA6NFA1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.28■□□□□ 0.84
TRABD2BA6NFA1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.28■□□□□ 0.84
TRABD2BA6NFA1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.28■□□□□ 0.84
TRABD2BA6NFA1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.28■□□□□ 0.84
TRABD2BA6NFA1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.28■□□□□ 0.84
TRABD2BA6NFA1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRABD2BA6NFA1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.27■□□□□ 0.84
TRABD2BA6NFA1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRABD2BA6NFA1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRABD2BA6NFA1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.27■□□□□ 0.84
TRABD2BA6NFA1 AP004607.7-201ENST00000527152 1677 ntBASIC20.27■□□□□ 0.84
TRABD2BA6NFA1 ECEL1P3-201ENST00000427961 737 ntBASIC20.27■□□□□ 0.84
TRABD2BA6NFA1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.27■□□□□ 0.84
TRABD2BA6NFA1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.27■□□□□ 0.84
TRABD2BA6NFA1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRABD2BA6NFA1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRABD2BA6NFA1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.27■□□□□ 0.84
TRABD2BA6NFA1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRABD2BA6NFA1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRABD2BA6NFA1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.26■□□□□ 0.83
TRABD2BA6NFA1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.26■□□□□ 0.83
TRABD2BA6NFA1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRABD2BA6NFA1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRABD2BA6NFA1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRABD2BA6NFA1 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
TRABD2BA6NFA1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRABD2BA6NFA1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRABD2BA6NFA1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.26■□□□□ 0.83
TRABD2BA6NFA1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.26■□□□□ 0.83
TRABD2BA6NFA1 AP003097.1-201ENST00000530657 1135 ntBASIC20.26■□□□□ 0.83
TRABD2BA6NFA1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.26■□□□□ 0.83
TRABD2BA6NFA1 EEF1DP3-203ENST00000566025 782 ntBASIC20.26■□□□□ 0.83
TRABD2BA6NFA1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.26■□□□□ 0.83
TRABD2BA6NFA1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRABD2BA6NFA1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.26■□□□□ 0.83
TRABD2BA6NFA1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRABD2BA6NFA1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TRABD2BA6NFA1 C9orf163-202ENST00000624034 2573 ntBASIC20.26■□□□□ 0.83
TRABD2BA6NFA1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TRABD2BA6NFA1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
TRABD2BA6NFA1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRABD2BA6NFA1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRABD2BA6NFA1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRABD2BA6NFA1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRABD2BA6NFA1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRABD2BA6NFA1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRABD2BA6NFA1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TRABD2BA6NFA1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TRABD2BA6NFA1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRABD2BA6NFA1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.25■□□□□ 0.83
TRABD2BA6NFA1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.25■□□□□ 0.83
TRABD2BA6NFA1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.25■□□□□ 0.83
TRABD2BA6NFA1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRABD2BA6NFA1 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TRABD2BA6NFA1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
TRABD2BA6NFA1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRABD2BA6NFA1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TRABD2BA6NFA1 AC010980.2-201ENST00000587099 1412 ntBASIC20.25■□□□□ 0.83
TRABD2BA6NFA1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
TRABD2BA6NFA1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRABD2BA6NFA1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
TRABD2BA6NFA1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.24■□□□□ 0.83
TRABD2BA6NFA1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
TRABD2BA6NFA1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRABD2BA6NFA1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRABD2BA6NFA1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.24■□□□□ 0.83
TRABD2BA6NFA1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRABD2BA6NFA1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRABD2BA6NFA1 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.24■□□□□ 0.83
TRABD2BA6NFA1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.24■□□□□ 0.83
TRABD2BA6NFA1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.24■□□□□ 0.83
TRABD2BA6NFA1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRABD2BA6NFA1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRABD2BA6NFA1 AC053503.5-201ENST00000601508 636 ntBASIC20.24■□□□□ 0.83
TRABD2BA6NFA1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TRABD2BA6NFA1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.24■□□□□ 0.83
TRABD2BA6NFA1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRABD2BA6NFA1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.23■□□□□ 0.83
TRABD2BA6NFA1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRABD2BA6NFA1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.23■□□□□ 0.83
TRABD2BA6NFA1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.23■□□□□ 0.83
TRABD2BA6NFA1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRABD2BA6NFA1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TRABD2BA6NFA1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TRABD2BA6NFA1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.23■□□□□ 0.83
TRABD2BA6NFA1 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
TRABD2BA6NFA1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms