Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC31.46■■■□□ 2.63
HFM1A2PYH4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC31.46■■■□□ 2.63
HFM1A2PYH4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC31.46■■■□□ 2.63
HFM1A2PYH4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC31.45■■■□□ 2.63
HFM1A2PYH4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC31.45■■■□□ 2.63
HFM1A2PYH4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC31.45■■■□□ 2.63
HFM1A2PYH4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
HFM1A2PYH4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
HFM1A2PYH4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
HFM1A2PYH4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
HFM1A2PYH4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC31.45■■■□□ 2.63
HFM1A2PYH4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC31.45■■■□□ 2.63
HFM1A2PYH4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC31.45■■■□□ 2.63
HFM1A2PYH4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC31.45■■■□□ 2.62
HFM1A2PYH4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
HFM1A2PYH4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC31.44■■■□□ 2.62
HFM1A2PYH4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC31.44■■■□□ 2.62
HFM1A2PYH4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC31.44■■■□□ 2.62
HFM1A2PYH4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC31.44■■■□□ 2.62
HFM1A2PYH4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC31.44■■■□□ 2.62
HFM1A2PYH4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
HFM1A2PYH4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC31.44■■■□□ 2.62
HFM1A2PYH4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC31.44■■■□□ 2.62
HFM1A2PYH4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
HFM1A2PYH4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
HFM1A2PYH4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC31.43■■■□□ 2.62
HFM1A2PYH4 CYP2T1P-201ENST00000432607 1285 ntBASIC31.43■■■□□ 2.62
HFM1A2PYH4 GUSBP6-202ENST00000438529 1198 ntBASIC31.43■■■□□ 2.62
HFM1A2PYH4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC31.43■■■□□ 2.62
HFM1A2PYH4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC31.43■■■□□ 2.62
HFM1A2PYH4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC31.43■■■□□ 2.62
HFM1A2PYH4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
HFM1A2PYH4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC31.43■■■□□ 2.62
HFM1A2PYH4 NCF1B-203ENST00000435988 1254 ntBASIC31.42■■■□□ 2.62
HFM1A2PYH4 MAP2K4P1-201ENST00000438453 1195 ntBASIC31.42■■■□□ 2.62
HFM1A2PYH4 TERF1P5-201ENST00000477545 1207 ntBASIC31.42■■■□□ 2.62
HFM1A2PYH4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
HFM1A2PYH4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC31.42■■■□□ 2.62
HFM1A2PYH4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
HFM1A2PYH4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
HFM1A2PYH4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
HFM1A2PYH4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC31.42■■■□□ 2.62
HFM1A2PYH4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
HFM1A2PYH4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
HFM1A2PYH4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC31.41■■■□□ 2.62
HFM1A2PYH4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC31.41■■■□□ 2.62
HFM1A2PYH4 AC120498.10-201ENST00000621827 505 ntBASIC31.41■■■□□ 2.62
HFM1A2PYH4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
HFM1A2PYH4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC31.41■■■□□ 2.62
HFM1A2PYH4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
HFM1A2PYH4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
HFM1A2PYH4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
HFM1A2PYH4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
HFM1A2PYH4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
HFM1A2PYH4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
HFM1A2PYH4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
HFM1A2PYH4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
HFM1A2PYH4 HLA-L-209ENST00000420110 1011 ntBASIC31.41■■■□□ 2.62
HFM1A2PYH4 AC007322.1-201ENST00000426983 750 ntBASIC31.41■■■□□ 2.62
HFM1A2PYH4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
HFM1A2PYH4 AC006970.2-201ENST00000450065 779 ntBASIC31.41■■■□□ 2.62
HFM1A2PYH4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC31.41■■■□□ 2.62
HFM1A2PYH4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
HFM1A2PYH4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
HFM1A2PYH4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC31.4■■■□□ 2.62
HFM1A2PYH4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
HFM1A2PYH4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
HFM1A2PYH4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
HFM1A2PYH4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
HFM1A2PYH4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
HFM1A2PYH4 AC005181.1-201ENST00000604782 1256 ntBASIC31.4■■■□□ 2.62
HFM1A2PYH4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC31.4■■■□□ 2.62
HFM1A2PYH4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
HFM1A2PYH4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC31.39■■■□□ 2.62
HFM1A2PYH4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
HFM1A2PYH4 EP400NL-214ENST00000641289 2402 ntBASIC31.39■■■□□ 2.62
HFM1A2PYH4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC31.39■■■□□ 2.62
HFM1A2PYH4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
HFM1A2PYH4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC31.39■■■□□ 2.62
HFM1A2PYH4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
HFM1A2PYH4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC31.39■■■□□ 2.62
HFM1A2PYH4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.61
HFM1A2PYH4 AC068338.2-201ENST00000563278 1430 ntBASIC31.38■■■□□ 2.61
HFM1A2PYH4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
HFM1A2PYH4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
HFM1A2PYH4 AC104771.1-201ENST00000603335 964 ntBASIC31.38■■■□□ 2.61
HFM1A2PYH4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
HFM1A2PYH4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
HFM1A2PYH4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
HFM1A2PYH4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
HFM1A2PYH4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC31.37■■■□□ 2.61
HFM1A2PYH4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC31.37■■■□□ 2.61
HFM1A2PYH4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC31.37■■■□□ 2.61
HFM1A2PYH4 GXYLT1P5-201ENST00000614548 1189 ntBASIC31.37■■■□□ 2.61
HFM1A2PYH4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
HFM1A2PYH4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC31.37■■■□□ 2.61
HFM1A2PYH4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
HFM1A2PYH4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
HFM1A2PYH4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
HFM1A2PYH4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC31.36■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms