Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 AC026471.6-201ENST00000622954 1905 ntBASIC21.02■□□□□ 0.96
CCDC189A1A4V9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC189A1A4V9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC189A1A4V9 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC189A1A4V9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC189A1A4V9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC189A1A4V9 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CCDC189A1A4V9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC189A1A4V9 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC189A1A4V9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC189A1A4V9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CCDC189A1A4V9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC189A1A4V9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC189A1A4V9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.95
CCDC189A1A4V9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC189A1A4V9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCDC189A1A4V9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC189A1A4V9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CCDC189A1A4V9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC189A1A4V9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC189A1A4V9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC189A1A4V9 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC189A1A4V9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC189A1A4V9 SLC47A1P1-202ENST00000449666 945 ntBASIC21.01■□□□□ 0.95
CCDC189A1A4V9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
CCDC189A1A4V9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
CCDC189A1A4V9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC189A1A4V9 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC189A1A4V9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CCDC189A1A4V9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC189A1A4V9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC189A1A4V9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
CCDC189A1A4V9 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC189A1A4V9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CCDC189A1A4V9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC189A1A4V9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC189A1A4V9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC189A1A4V9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC189A1A4V9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21■□□□□ 0.95
CCDC189A1A4V9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21■□□□□ 0.95
CCDC189A1A4V9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC189A1A4V9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC189A1A4V9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC189A1A4V9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC189A1A4V9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC189A1A4V9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21■□□□□ 0.95
CCDC189A1A4V9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
CCDC189A1A4V9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC189A1A4V9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC189A1A4V9 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC189A1A4V9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCDC189A1A4V9 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC189A1A4V9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC189A1A4V9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC189A1A4V9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC189A1A4V9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC189A1A4V9 BX842568.3-201ENST00000418104 571 ntBASIC20.99■□□□□ 0.95
CCDC189A1A4V9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.99■□□□□ 0.95
CCDC189A1A4V9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC189A1A4V9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC189A1A4V9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC189A1A4V9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC189A1A4V9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CCDC189A1A4V9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CCDC189A1A4V9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC189A1A4V9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC189A1A4V9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC189A1A4V9 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC189A1A4V9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC189A1A4V9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC189A1A4V9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CCDC189A1A4V9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC189A1A4V9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC189A1A4V9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC189A1A4V9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CCDC189A1A4V9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC189A1A4V9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC189A1A4V9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC189A1A4V9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC189A1A4V9 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC189A1A4V9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC189A1A4V9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC189A1A4V9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC189A1A4V9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC189A1A4V9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.97■□□□□ 0.95
CCDC189A1A4V9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC189A1A4V9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC189A1A4V9 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC189A1A4V9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC189A1A4V9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC189A1A4V9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
CCDC189A1A4V9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC189A1A4V9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.97■□□□□ 0.95
CCDC189A1A4V9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC189A1A4V9 Z98882.1-201ENST00000622160 2253 ntBASIC20.97■□□□□ 0.95
CCDC189A1A4V9 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC189A1A4V9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC189A1A4V9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CCDC189A1A4V9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC189A1A4V9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms