Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TRAV17A0A0B4J275 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TRAV17A0A0B4J275 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV17A0A0B4J275 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV17A0A0B4J275 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV17A0A0B4J275 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV17A0A0B4J275 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV17A0A0B4J275 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV17A0A0B4J275 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.15■□□□□ 0.66
TRAV17A0A0B4J275 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.15■□□□□ 0.66
TRAV17A0A0B4J275 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.15■□□□□ 0.66
TRAV17A0A0B4J275 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TRAV17A0A0B4J275 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV17A0A0B4J275 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV17A0A0B4J275 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV17A0A0B4J275 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.15■□□□□ 0.66
TRAV17A0A0B4J275 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV17A0A0B4J275 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRAV17A0A0B4J275 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.15■□□□□ 0.66
TRAV17A0A0B4J275 AC010980.2-201ENST00000587099 1412 ntBASIC19.15■□□□□ 0.66
TRAV17A0A0B4J275 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV17A0A0B4J275 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
TRAV17A0A0B4J275 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
TRAV17A0A0B4J275 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRAV17A0A0B4J275 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.14■□□□□ 0.65
TRAV17A0A0B4J275 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV17A0A0B4J275 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV17A0A0B4J275 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.14■□□□□ 0.65
TRAV17A0A0B4J275 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.14■□□□□ 0.65
TRAV17A0A0B4J275 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV17A0A0B4J275 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV17A0A0B4J275 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TRAV17A0A0B4J275 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV17A0A0B4J275 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV17A0A0B4J275 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV17A0A0B4J275 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV17A0A0B4J275 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV17A0A0B4J275 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.13■□□□□ 0.65
TRAV17A0A0B4J275 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.13■□□□□ 0.65
TRAV17A0A0B4J275 AC066615.1-201ENST00000640911 628 ntBASIC19.13■□□□□ 0.65
TRAV17A0A0B4J275 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV17A0A0B4J275 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV17A0A0B4J275 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV17A0A0B4J275 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV17A0A0B4J275 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV17A0A0B4J275 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV17A0A0B4J275 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRAV17A0A0B4J275 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TRAV17A0A0B4J275 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV17A0A0B4J275 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRAV17A0A0B4J275 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV17A0A0B4J275 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV17A0A0B4J275 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV17A0A0B4J275 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV17A0A0B4J275 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV17A0A0B4J275 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRAV17A0A0B4J275 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV17A0A0B4J275 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV17A0A0B4J275 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV17A0A0B4J275 KRT18P29-201ENST00000397031 1267 ntBASIC19.12■□□□□ 0.65
TRAV17A0A0B4J275 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAV17A0A0B4J275 AC245052.3-201ENST00000450182 901 ntBASIC19.12■□□□□ 0.65
TRAV17A0A0B4J275 MYC-209ENST00000641252 345 ntBASIC19.12■□□□□ 0.65
TRAV17A0A0B4J275 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.12■□□□□ 0.65
TRAV17A0A0B4J275 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.12■□□□□ 0.65
TRAV17A0A0B4J275 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
TRAV17A0A0B4J275 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.11■□□□□ 0.65
TRAV17A0A0B4J275 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAV17A0A0B4J275 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV17A0A0B4J275 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAV17A0A0B4J275 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAV17A0A0B4J275 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV17A0A0B4J275 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRAV17A0A0B4J275 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TRAV17A0A0B4J275 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
TRAV17A0A0B4J275 AC091874.3-201ENST00000512672 1195 ntBASIC19.11■□□□□ 0.65
TRAV17A0A0B4J275 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV17A0A0B4J275 ITM2C-210ENST00000620962 501 ntBASIC19.11■□□□□ 0.65
TRAV17A0A0B4J275 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV17A0A0B4J275 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.11■□□□□ 0.65
TRAV17A0A0B4J275 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV17A0A0B4J275 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV17A0A0B4J275 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV17A0A0B4J275 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TRAV17A0A0B4J275 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TRAV17A0A0B4J275 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.1■□□□□ 0.65
TRAV17A0A0B4J275 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV17A0A0B4J275 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV17A0A0B4J275 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.1■□□□□ 0.65
TRAV17A0A0B4J275 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.1■□□□□ 0.65
TRAV17A0A0B4J275 AC083880.1-201ENST00000608266 535 ntBASIC19.1■□□□□ 0.65
TRAV17A0A0B4J275 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV17A0A0B4J275 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV17A0A0B4J275 AC127496.7-201ENST00000625110 1798 ntBASIC19.1■□□□□ 0.65
TRAV17A0A0B4J275 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV17A0A0B4J275 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV17A0A0B4J275 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV17A0A0B4J275 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.1■□□□□ 0.65
TRAV17A0A0B4J275 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV17A0A0B4J275 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms