Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHA6Q9UN73 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHA6Q9UN73 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC24.29■■□□□ 1.48
PCDHA6Q9UN73 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHA6Q9UN73 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC24.29■■□□□ 1.48
PCDHA6Q9UN73 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.29■■□□□ 1.48
PCDHA6Q9UN73 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHA6Q9UN73 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
PCDHA6Q9UN73 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHA6Q9UN73 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHA6Q9UN73 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC24.29■■□□□ 1.48
PCDHA6Q9UN73 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHA6Q9UN73 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA6Q9UN73 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA6Q9UN73 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA6Q9UN73 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA6Q9UN73 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.28■■□□□ 1.48
PCDHA6Q9UN73 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
PCDHA6Q9UN73 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA6Q9UN73 AC004911.1-201ENST00000416316 871 ntBASIC24.28■■□□□ 1.48
PCDHA6Q9UN73 AC006015.1-201ENST00000429970 570 ntBASIC24.28■■□□□ 1.48
PCDHA6Q9UN73 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC24.28■■□□□ 1.48
PCDHA6Q9UN73 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC24.28■■□□□ 1.48
PCDHA6Q9UN73 EEF1DP3-203ENST00000566025 782 ntBASIC24.28■■□□□ 1.48
PCDHA6Q9UN73 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDHA6Q9UN73 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDHA6Q9UN73 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHA6Q9UN73 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA6Q9UN73 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC24.27■■□□□ 1.48
PCDHA6Q9UN73 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC24.27■■□□□ 1.48
PCDHA6Q9UN73 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA6Q9UN73 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA6Q9UN73 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC24.27■■□□□ 1.48
PCDHA6Q9UN73 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA6Q9UN73 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC24.27■■□□□ 1.48
PCDHA6Q9UN73 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA6Q9UN73 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
PCDHA6Q9UN73 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHA6Q9UN73 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA6Q9UN73 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA6Q9UN73 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC24.26■■□□□ 1.47
PCDHA6Q9UN73 HSCB-202ENST00000398941 955 ntTSL 2 BASIC24.26■■□□□ 1.47
PCDHA6Q9UN73 AC016769.1-201ENST00000409132 1010 ntBASIC24.26■■□□□ 1.47
PCDHA6Q9UN73 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC24.26■■□□□ 1.47
PCDHA6Q9UN73 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC24.26■■□□□ 1.47
PCDHA6Q9UN73 AC053503.5-201ENST00000601508 636 ntBASIC24.26■■□□□ 1.47
PCDHA6Q9UN73 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA6Q9UN73 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.26■■□□□ 1.47
PCDHA6Q9UN73 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHA6Q9UN73 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
PCDHA6Q9UN73 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA6Q9UN73 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24.25■■□□□ 1.47
PCDHA6Q9UN73 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA6Q9UN73 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.25■■□□□ 1.47
PCDHA6Q9UN73 AP001160.3-201ENST00000601484 763 ntBASIC24.25■■□□□ 1.47
PCDHA6Q9UN73 AC244015.2-201ENST00000616358 1861 ntBASIC24.25■■□□□ 1.47
PCDHA6Q9UN73 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA6Q9UN73 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA6Q9UN73 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHA6Q9UN73 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDHA6Q9UN73 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC24.24■■□□□ 1.47
PCDHA6Q9UN73 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDHA6Q9UN73 AC138907.5-202ENST00000569484 235 ntBASIC24.24■■□□□ 1.47
PCDHA6Q9UN73 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDHA6Q9UN73 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC24.24■■□□□ 1.47
PCDHA6Q9UN73 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
PCDHA6Q9UN73 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHA6Q9UN73 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHA6Q9UN73 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHA6Q9UN73 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHA6Q9UN73 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHA6Q9UN73 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHA6Q9UN73 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHA6Q9UN73 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHA6Q9UN73 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHA6Q9UN73 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHA6Q9UN73 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHA6Q9UN73 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHA6Q9UN73 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHA6Q9UN73 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC24.23■■□□□ 1.47
PCDHA6Q9UN73 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHA6Q9UN73 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHA6Q9UN73 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHA6Q9UN73 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHA6Q9UN73 RNF146-206ENST00000480444 843 ntTSL 2 BASIC24.23■■□□□ 1.47
PCDHA6Q9UN73 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC24.23■■□□□ 1.47
PCDHA6Q9UN73 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.23■■□□□ 1.47
PCDHA6Q9UN73 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
PCDHA6Q9UN73 MFF-203ENST00000349901 1716 ntTSL 2 BASIC24.23■■□□□ 1.47
PCDHA6Q9UN73 TUB-203ENST00000534099 1759 ntTSL 2 BASIC24.23■■□□□ 1.47
PCDHA6Q9UN73 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC24.23■■□□□ 1.47
PCDHA6Q9UN73 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHA6Q9UN73 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
PCDHA6Q9UN73 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC24.22■■□□□ 1.47
PCDHA6Q9UN73 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHA6Q9UN73 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHA6Q9UN73 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC24.22■■□□□ 1.47
PCDHA6Q9UN73 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
PCDHA6Q9UN73 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHA6Q9UN73 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms