Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.45■□□□□ 0.7
UBQLN4Q9NRR5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.45■□□□□ 0.7
UBQLN4Q9NRR5 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.45■□□□□ 0.7
UBQLN4Q9NRR5 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.45■□□□□ 0.7
UBQLN4Q9NRR5 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.45■□□□□ 0.7
UBQLN4Q9NRR5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN4Q9NRR5 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN4Q9NRR5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN4Q9NRR5 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN4Q9NRR5 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.45■□□□□ 0.7
UBQLN4Q9NRR5 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.45■□□□□ 0.7
UBQLN4Q9NRR5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN4Q9NRR5 AC019069.1-201ENST00000610008 1333 ntBASIC19.45■□□□□ 0.7
UBQLN4Q9NRR5 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBQLN4Q9NRR5 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 TERF1P2-201ENST00000583350 1212 ntBASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBQLN4Q9NRR5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN4Q9NRR5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN4Q9NRR5 CLDN5-201ENST00000403084 2357 ntBASIC19.43■□□□□ 0.7
UBQLN4Q9NRR5 KRT87P-202ENST00000534226 1464 ntBASIC19.43■□□□□ 0.7
UBQLN4Q9NRR5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.43■□□□□ 0.7
UBQLN4Q9NRR5 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN4Q9NRR5 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
UBQLN4Q9NRR5 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.43■□□□□ 0.7
UBQLN4Q9NRR5 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.43■□□□□ 0.7
UBQLN4Q9NRR5 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN4Q9NRR5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.43■□□□□ 0.7
UBQLN4Q9NRR5 AC053503.5-201ENST00000601508 636 ntBASIC19.43■□□□□ 0.7
UBQLN4Q9NRR5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN4Q9NRR5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN4Q9NRR5 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN4Q9NRR5 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
UBQLN4Q9NRR5 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
UBQLN4Q9NRR5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBQLN4Q9NRR5 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN4Q9NRR5 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.42■□□□□ 0.7
UBQLN4Q9NRR5 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
UBQLN4Q9NRR5 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN4Q9NRR5 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN4Q9NRR5 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN4Q9NRR5 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN4Q9NRR5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.42■□□□□ 0.7
UBQLN4Q9NRR5 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.42■□□□□ 0.7
UBQLN4Q9NRR5 EEF1DP3-203ENST00000566025 782 ntBASIC19.42■□□□□ 0.7
UBQLN4Q9NRR5 CCDC92B-201ENST00000575506 885 ntBASIC19.42■□□□□ 0.7
UBQLN4Q9NRR5 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN4Q9NRR5 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN4Q9NRR5 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
UBQLN4Q9NRR5 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBQLN4Q9NRR5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.42■□□□□ 0.7
UBQLN4Q9NRR5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.42■□□□□ 0.7
UBQLN4Q9NRR5 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.42■□□□□ 0.7
UBQLN4Q9NRR5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
UBQLN4Q9NRR5 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN4Q9NRR5 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN4Q9NRR5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN4Q9NRR5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN4Q9NRR5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.41■□□□□ 0.7
UBQLN4Q9NRR5 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN4Q9NRR5 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.41■□□□□ 0.7
UBQLN4Q9NRR5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN4Q9NRR5 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.41■□□□□ 0.7
UBQLN4Q9NRR5 KRT18P14-201ENST00000534205 1250 ntBASIC19.41■□□□□ 0.7
UBQLN4Q9NRR5 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.41■□□□□ 0.7
UBQLN4Q9NRR5 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN4Q9NRR5 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN4Q9NRR5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.41■□□□□ 0.7
UBQLN4Q9NRR5 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
UBQLN4Q9NRR5 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
UBQLN4Q9NRR5 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN4Q9NRR5 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.41■□□□□ 0.7
UBQLN4Q9NRR5 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBQLN4Q9NRR5 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBQLN4Q9NRR5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms