Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KLHL1Q9NR64 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
KLHL1Q9NR64 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KLHL1Q9NR64 AC080038.3-201ENST00000623346 1952 ntBASIC19.83■□□□□ 0.77
KLHL1Q9NR64 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.83■□□□□ 0.77
KLHL1Q9NR64 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KLHL1Q9NR64 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
KLHL1Q9NR64 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
KLHL1Q9NR64 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.83■□□□□ 0.77
KLHL1Q9NR64 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.83■□□□□ 0.77
KLHL1Q9NR64 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.83■□□□□ 0.77
KLHL1Q9NR64 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.83■□□□□ 0.77
KLHL1Q9NR64 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.83■□□□□ 0.77
KLHL1Q9NR64 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.83■□□□□ 0.77
KLHL1Q9NR64 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.83■□□□□ 0.76
KLHL1Q9NR64 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
KLHL1Q9NR64 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KLHL1Q9NR64 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
KLHL1Q9NR64 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
KLHL1Q9NR64 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KLHL1Q9NR64 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KLHL1Q9NR64 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
KLHL1Q9NR64 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KLHL1Q9NR64 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KLHL1Q9NR64 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KLHL1Q9NR64 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
KLHL1Q9NR64 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
KLHL1Q9NR64 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
KLHL1Q9NR64 AC007375.3-201ENST00000600936 2314 ntBASIC19.82■□□□□ 0.76
KLHL1Q9NR64 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
KLHL1Q9NR64 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KLHL1Q9NR64 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KLHL1Q9NR64 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KLHL1Q9NR64 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KLHL1Q9NR64 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.82■□□□□ 0.76
KLHL1Q9NR64 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.82■□□□□ 0.76
KLHL1Q9NR64 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
KLHL1Q9NR64 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.82■□□□□ 0.76
KLHL1Q9NR64 AC079140.4-201ENST00000507448 529 ntBASIC19.82■□□□□ 0.76
KLHL1Q9NR64 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.82■□□□□ 0.76
KLHL1Q9NR64 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
KLHL1Q9NR64 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KLHL1Q9NR64 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KLHL1Q9NR64 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
KLHL1Q9NR64 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KLHL1Q9NR64 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KLHL1Q9NR64 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
KLHL1Q9NR64 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
KLHL1Q9NR64 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KLHL1Q9NR64 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KLHL1Q9NR64 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KLHL1Q9NR64 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KLHL1Q9NR64 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
KLHL1Q9NR64 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.81■□□□□ 0.76
KLHL1Q9NR64 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KLHL1Q9NR64 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KLHL1Q9NR64 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
KLHL1Q9NR64 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.81■□□□□ 0.76
KLHL1Q9NR64 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KLHL1Q9NR64 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
KLHL1Q9NR64 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
KLHL1Q9NR64 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
KLHL1Q9NR64 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.8■□□□□ 0.76
KLHL1Q9NR64 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KLHL1Q9NR64 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
KLHL1Q9NR64 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KLHL1Q9NR64 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KLHL1Q9NR64 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.8■□□□□ 0.76
KLHL1Q9NR64 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.8■□□□□ 0.76
KLHL1Q9NR64 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.8■□□□□ 0.76
KLHL1Q9NR64 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.8■□□□□ 0.76
KLHL1Q9NR64 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.8■□□□□ 0.76
KLHL1Q9NR64 AC139530.1-201ENST00000575312 1977 ntBASIC19.8■□□□□ 0.76
KLHL1Q9NR64 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KLHL1Q9NR64 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KLHL1Q9NR64 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KLHL1Q9NR64 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KLHL1Q9NR64 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
KLHL1Q9NR64 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
KLHL1Q9NR64 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KLHL1Q9NR64 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KLHL1Q9NR64 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KLHL1Q9NR64 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.79■□□□□ 0.76
KLHL1Q9NR64 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.79■□□□□ 0.76
KLHL1Q9NR64 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
KLHL1Q9NR64 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KLHL1Q9NR64 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KLHL1Q9NR64 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KLHL1Q9NR64 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KLHL1Q9NR64 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KLHL1Q9NR64 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
KLHL1Q9NR64 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KLHL1Q9NR64 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KLHL1Q9NR64 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KLHL1Q9NR64 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KLHL1Q9NR64 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
KLHL1Q9NR64 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
KLHL1Q9NR64 KRT19P1-201ENST00000405746 1186 ntBASIC19.78■□□□□ 0.76
KLHL1Q9NR64 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.78■□□□□ 0.76
KLHL1Q9NR64 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms