Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
VRTNQ9H8Y1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.62■■□□□ 1.21
VRTNQ9H8Y1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.62■■□□□ 1.21
VRTNQ9H8Y1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VRTNQ9H8Y1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
VRTNQ9H8Y1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.62■■□□□ 1.21
VRTNQ9H8Y1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.62■■□□□ 1.21
VRTNQ9H8Y1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
VRTNQ9H8Y1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
VRTNQ9H8Y1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
VRTNQ9H8Y1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VRTNQ9H8Y1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.61■■□□□ 1.21
VRTNQ9H8Y1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
VRTNQ9H8Y1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
VRTNQ9H8Y1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
VRTNQ9H8Y1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VRTNQ9H8Y1 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.61■■□□□ 1.21
VRTNQ9H8Y1 AC008175.2-201ENST00000612840 297 ntBASIC22.61■■□□□ 1.21
VRTNQ9H8Y1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VRTNQ9H8Y1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
VRTNQ9H8Y1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
VRTNQ9H8Y1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.61■■□□□ 1.21
VRTNQ9H8Y1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.6■■□□□ 1.21
VRTNQ9H8Y1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
VRTNQ9H8Y1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
VRTNQ9H8Y1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
VRTNQ9H8Y1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.6■■□□□ 1.21
VRTNQ9H8Y1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
VRTNQ9H8Y1 FBXW4P1-201ENST00000426721 2239 ntBASIC22.6■■□□□ 1.21
VRTNQ9H8Y1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
VRTNQ9H8Y1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.6■■□□□ 1.21
VRTNQ9H8Y1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
VRTNQ9H8Y1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.6■■□□□ 1.21
VRTNQ9H8Y1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.6■■□□□ 1.21
VRTNQ9H8Y1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.6■■□□□ 1.21
VRTNQ9H8Y1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.6■■□□□ 1.21
VRTNQ9H8Y1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
VRTNQ9H8Y1 LINC00565-201ENST00000562710 2331 ntBASIC22.6■■□□□ 1.21
VRTNQ9H8Y1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
VRTNQ9H8Y1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
VRTNQ9H8Y1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
VRTNQ9H8Y1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
VRTNQ9H8Y1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
VRTNQ9H8Y1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
VRTNQ9H8Y1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
VRTNQ9H8Y1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
VRTNQ9H8Y1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
VRTNQ9H8Y1 SLC7A5P1-201ENST00000568957 537 ntBASIC22.59■■□□□ 1.21
VRTNQ9H8Y1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.59■■□□□ 1.21
VRTNQ9H8Y1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
VRTNQ9H8Y1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
VRTNQ9H8Y1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.59■■□□□ 1.21
VRTNQ9H8Y1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.58■■□□□ 1.21
VRTNQ9H8Y1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
VRTNQ9H8Y1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
VRTNQ9H8Y1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
VRTNQ9H8Y1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
VRTNQ9H8Y1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
VRTNQ9H8Y1 KRT18P11-201ENST00000435214 1283 ntBASIC22.58■■□□□ 1.21
VRTNQ9H8Y1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.58■■□□□ 1.21
VRTNQ9H8Y1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
VRTNQ9H8Y1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.58■■□□□ 1.21
VRTNQ9H8Y1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.58■■□□□ 1.21
VRTNQ9H8Y1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.58■■□□□ 1.21
VRTNQ9H8Y1 AC092437.1-201ENST00000624794 1048 ntBASIC22.58■■□□□ 1.21
VRTNQ9H8Y1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
VRTNQ9H8Y1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
VRTNQ9H8Y1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
VRTNQ9H8Y1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VRTNQ9H8Y1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
VRTNQ9H8Y1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
VRTNQ9H8Y1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VRTNQ9H8Y1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VRTNQ9H8Y1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VRTNQ9H8Y1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VRTNQ9H8Y1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
VRTNQ9H8Y1 AC137761.2-201ENST00000561729 223 ntBASIC22.57■■□□□ 1.2
VRTNQ9H8Y1 AC145350.3-201ENST00000569033 163 ntBASIC22.57■■□□□ 1.2
VRTNQ9H8Y1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
VRTNQ9H8Y1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.57■■□□□ 1.2
VRTNQ9H8Y1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VRTNQ9H8Y1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
VRTNQ9H8Y1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
VRTNQ9H8Y1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.57■■□□□ 1.2
VRTNQ9H8Y1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.57■■□□□ 1.2
VRTNQ9H8Y1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
VRTNQ9H8Y1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
VRTNQ9H8Y1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
VRTNQ9H8Y1 KRT16P2-201ENST00000414673 1423 ntBASIC22.57■■□□□ 1.2
VRTNQ9H8Y1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.56■■□□□ 1.2
VRTNQ9H8Y1 AC061975.6-201ENST00000579045 1553 ntBASIC22.56■■□□□ 1.2
VRTNQ9H8Y1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
VRTNQ9H8Y1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.56■■□□□ 1.2
VRTNQ9H8Y1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.56■■□□□ 1.2
VRTNQ9H8Y1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.56■■□□□ 1.2
VRTNQ9H8Y1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.56■■□□□ 1.2
VRTNQ9H8Y1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.56■■□□□ 1.2
VRTNQ9H8Y1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
VRTNQ9H8Y1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VRTNQ9H8Y1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms