Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.25■□□□□ 0.67
PCNX3Q9H6A9 Z98882.1-201ENST00000622160 2253 ntBASIC19.25■□□□□ 0.67
PCNX3Q9H6A9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.24■□□□□ 0.67
PCNX3Q9H6A9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCNX3Q9H6A9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCNX3Q9H6A9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
PCNX3Q9H6A9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.24■□□□□ 0.67
PCNX3Q9H6A9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PCNX3Q9H6A9 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PCNX3Q9H6A9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCNX3Q9H6A9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCNX3Q9H6A9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCNX3Q9H6A9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.24■□□□□ 0.67
PCNX3Q9H6A9 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.24■□□□□ 0.67
PCNX3Q9H6A9 AC104564.3-201ENST00000582367 638 ntBASIC19.24■□□□□ 0.67
PCNX3Q9H6A9 AC022517.1-201ENST00000592429 346 ntBASIC19.24■□□□□ 0.67
PCNX3Q9H6A9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PCNX3Q9H6A9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PCNX3Q9H6A9 AF106564.1-201ENST00000607058 2553 ntBASIC19.23■□□□□ 0.67
PCNX3Q9H6A9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
PCNX3Q9H6A9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCNX3Q9H6A9 AC092437.1-201ENST00000624794 1048 ntBASIC19.23■□□□□ 0.67
PCNX3Q9H6A9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.23■□□□□ 0.67
PCNX3Q9H6A9 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCNX3Q9H6A9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PCNX3Q9H6A9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCNX3Q9H6A9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.23■□□□□ 0.67
PCNX3Q9H6A9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCNX3Q9H6A9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.22■□□□□ 0.67
PCNX3Q9H6A9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PCNX3Q9H6A9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCNX3Q9H6A9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCNX3Q9H6A9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.22■□□□□ 0.67
PCNX3Q9H6A9 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.22■□□□□ 0.67
PCNX3Q9H6A9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.22■□□□□ 0.67
PCNX3Q9H6A9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.22■□□□□ 0.67
PCNX3Q9H6A9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCNX3Q9H6A9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.22■□□□□ 0.67
PCNX3Q9H6A9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.22■□□□□ 0.67
PCNX3Q9H6A9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PCNX3Q9H6A9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCNX3Q9H6A9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCNX3Q9H6A9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCNX3Q9H6A9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCNX3Q9H6A9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.22■□□□□ 0.67
PCNX3Q9H6A9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
PCNX3Q9H6A9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCNX3Q9H6A9 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCNX3Q9H6A9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.22■□□□□ 0.67
PCNX3Q9H6A9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCNX3Q9H6A9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.22■□□□□ 0.67
PCNX3Q9H6A9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.22■□□□□ 0.67
PCNX3Q9H6A9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.22■□□□□ 0.67
PCNX3Q9H6A9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCNX3Q9H6A9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCNX3Q9H6A9 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCNX3Q9H6A9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PCNX3Q9H6A9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.21■□□□□ 0.67
PCNX3Q9H6A9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCNX3Q9H6A9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.21■□□□□ 0.67
PCNX3Q9H6A9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCNX3Q9H6A9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.21■□□□□ 0.67
PCNX3Q9H6A9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PCNX3Q9H6A9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCNX3Q9H6A9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.21■□□□□ 0.67
PCNX3Q9H6A9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.21■□□□□ 0.67
PCNX3Q9H6A9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.66
PCNX3Q9H6A9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.66
PCNX3Q9H6A9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.2■□□□□ 0.66
PCNX3Q9H6A9 AC079140.4-201ENST00000507448 529 ntBASIC19.2■□□□□ 0.66
PCNX3Q9H6A9 AC137761.2-201ENST00000561729 223 ntBASIC19.2■□□□□ 0.66
PCNX3Q9H6A9 AC145350.3-201ENST00000569033 163 ntBASIC19.2■□□□□ 0.66
PCNX3Q9H6A9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.2■□□□□ 0.66
PCNX3Q9H6A9 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.2■□□□□ 0.66
PCNX3Q9H6A9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCNX3Q9H6A9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.2■□□□□ 0.66
PCNX3Q9H6A9 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCNX3Q9H6A9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCNX3Q9H6A9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.2■□□□□ 0.66
PCNX3Q9H6A9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PCNX3Q9H6A9 AC244015.2-201ENST00000616358 1861 ntBASIC19.2■□□□□ 0.66
PCNX3Q9H6A9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCNX3Q9H6A9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.2■□□□□ 0.66
PCNX3Q9H6A9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCNX3Q9H6A9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCNX3Q9H6A9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCNX3Q9H6A9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCNX3Q9H6A9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCNX3Q9H6A9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCNX3Q9H6A9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCNX3Q9H6A9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCNX3Q9H6A9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.19■□□□□ 0.66
PCNX3Q9H6A9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCNX3Q9H6A9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.19■□□□□ 0.66
PCNX3Q9H6A9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCNX3Q9H6A9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCNX3Q9H6A9 AC061975.6-201ENST00000579045 1553 ntBASIC19.19■□□□□ 0.66
PCNX3Q9H6A9 SLC7A5P2-201ENST00000553010 536 ntBASIC19.18■□□□□ 0.66
PCNX3Q9H6A9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.18■□□□□ 0.66
PCNX3Q9H6A9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms