Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ALX4Q9H161 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.82■□□□□ 0.44
ALX4Q9H161 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.82■□□□□ 0.44
ALX4Q9H161 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
ALX4Q9H161 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ALX4Q9H161 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ALX4Q9H161 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.82■□□□□ 0.44
ALX4Q9H161 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALX4Q9H161 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALX4Q9H161 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ALX4Q9H161 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALX4Q9H161 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALX4Q9H161 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALX4Q9H161 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.81■□□□□ 0.44
ALX4Q9H161 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALX4Q9H161 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ALX4Q9H161 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
ALX4Q9H161 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALX4Q9H161 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.81■□□□□ 0.44
ALX4Q9H161 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALX4Q9H161 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.81■□□□□ 0.44
ALX4Q9H161 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.8■□□□□ 0.44
ALX4Q9H161 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
ALX4Q9H161 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.8■□□□□ 0.44
ALX4Q9H161 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ALX4Q9H161 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALX4Q9H161 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.8■□□□□ 0.44
ALX4Q9H161 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALX4Q9H161 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALX4Q9H161 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALX4Q9H161 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALX4Q9H161 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALX4Q9H161 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ALX4Q9H161 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.8■□□□□ 0.44
ALX4Q9H161 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.8■□□□□ 0.44
ALX4Q9H161 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALX4Q9H161 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.8■□□□□ 0.44
ALX4Q9H161 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALX4Q9H161 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.8■□□□□ 0.44
ALX4Q9H161 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALX4Q9H161 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALX4Q9H161 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.8■□□□□ 0.44
ALX4Q9H161 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALX4Q9H161 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.8■□□□□ 0.44
ALX4Q9H161 AC073314.1-201ENST00000568729 2216 ntBASIC17.8■□□□□ 0.44
ALX4Q9H161 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.8■□□□□ 0.44
ALX4Q9H161 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ALX4Q9H161 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ALX4Q9H161 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ALX4Q9H161 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ALX4Q9H161 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.8■□□□□ 0.44
ALX4Q9H161 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
ALX4Q9H161 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
ALX4Q9H161 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.79■□□□□ 0.44
ALX4Q9H161 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ALX4Q9H161 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALX4Q9H161 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.79■□□□□ 0.44
ALX4Q9H161 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ALX4Q9H161 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALX4Q9H161 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALX4Q9H161 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.79■□□□□ 0.44
ALX4Q9H161 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALX4Q9H161 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.79■□□□□ 0.44
ALX4Q9H161 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ALX4Q9H161 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALX4Q9H161 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.79■□□□□ 0.44
ALX4Q9H161 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALX4Q9H161 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALX4Q9H161 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALX4Q9H161 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ALX4Q9H161 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALX4Q9H161 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ALX4Q9H161 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.79■□□□□ 0.44
ALX4Q9H161 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ALX4Q9H161 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.78■□□□□ 0.44
ALX4Q9H161 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALX4Q9H161 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALX4Q9H161 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALX4Q9H161 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ALX4Q9H161 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.78■□□□□ 0.44
ALX4Q9H161 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.78■□□□□ 0.44
ALX4Q9H161 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALX4Q9H161 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALX4Q9H161 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALX4Q9H161 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.78■□□□□ 0.44
ALX4Q9H161 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.78■□□□□ 0.44
ALX4Q9H161 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ALX4Q9H161 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.78■□□□□ 0.44
ALX4Q9H161 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
ALX4Q9H161 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ALX4Q9H161 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALX4Q9H161 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.78■□□□□ 0.44
ALX4Q9H161 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALX4Q9H161 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
ALX4Q9H161 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.78■□□□□ 0.44
ALX4Q9H161 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALX4Q9H161 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ALX4Q9H161 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALX4Q9H161 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ALX4Q9H161 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms