Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.01■■□□□ 1.11
RNF38Q9H0F5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
RNF38Q9H0F5 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RNF38Q9H0F5 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF38Q9H0F5 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22■■□□□ 1.11
RNF38Q9H0F5 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF38Q9H0F5 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22■■□□□ 1.11
RNF38Q9H0F5 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF38Q9H0F5 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
RNF38Q9H0F5 AC008175.2-201ENST00000612840 297 ntBASIC22■■□□□ 1.11
RNF38Q9H0F5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF38Q9H0F5 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF38Q9H0F5 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF38Q9H0F5 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF38Q9H0F5 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF38Q9H0F5 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.99■■□□□ 1.11
RNF38Q9H0F5 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.99■■□□□ 1.11
RNF38Q9H0F5 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF38Q9H0F5 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.99■■□□□ 1.11
RNF38Q9H0F5 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF38Q9H0F5 AL121832.2-201ENST00000610979 668 ntBASIC21.99■■□□□ 1.11
RNF38Q9H0F5 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.99■■□□□ 1.11
RNF38Q9H0F5 AC010542.4-201ENST00000563151 1910 ntBASIC21.99■■□□□ 1.11
RNF38Q9H0F5 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.99■■□□□ 1.11
RNF38Q9H0F5 AC061975.6-201ENST00000579045 1553 ntBASIC21.99■■□□□ 1.11
RNF38Q9H0F5 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RNF38Q9H0F5 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.98■■□□□ 1.11
RNF38Q9H0F5 AL355802.2-201ENST00000402069 882 ntBASIC21.98■■□□□ 1.11
RNF38Q9H0F5 POU5F1P4-201ENST00000413175 1085 ntBASIC21.98■■□□□ 1.11
RNF38Q9H0F5 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.98■■□□□ 1.11
RNF38Q9H0F5 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF38Q9H0F5 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.98■■□□□ 1.11
RNF38Q9H0F5 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RNF38Q9H0F5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RNF38Q9H0F5 FAM99A-202ENST00000538190 1989 ntBASIC21.98■■□□□ 1.11
RNF38Q9H0F5 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNF38Q9H0F5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF38Q9H0F5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.97■■□□□ 1.11
RNF38Q9H0F5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNF38Q9H0F5 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNF38Q9H0F5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNF38Q9H0F5 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.97■■□□□ 1.11
RNF38Q9H0F5 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF38Q9H0F5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF38Q9H0F5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.97■■□□□ 1.11
RNF38Q9H0F5 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
RNF38Q9H0F5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.97■■□□□ 1.11
RNF38Q9H0F5 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.97■■□□□ 1.11
RNF38Q9H0F5 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
RNF38Q9H0F5 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
RNF38Q9H0F5 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
RNF38Q9H0F5 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.96■■□□□ 1.11
RNF38Q9H0F5 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.96■■□□□ 1.11
RNF38Q9H0F5 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.96■■□□□ 1.11
RNF38Q9H0F5 GUSBP6-202ENST00000438529 1198 ntBASIC21.96■■□□□ 1.11
RNF38Q9H0F5 TSPY6P-201ENST00000448518 926 ntBASIC21.96■■□□□ 1.11
RNF38Q9H0F5 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.96■■□□□ 1.11
RNF38Q9H0F5 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RNF38Q9H0F5 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.96■■□□□ 1.11
RNF38Q9H0F5 AC013268.1-206ENST00000638368 961 ntBASIC21.96■■□□□ 1.11
RNF38Q9H0F5 AC112229.1-201ENST00000639295 961 ntBASIC21.96■■□□□ 1.11
RNF38Q9H0F5 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.96■■□□□ 1.11
RNF38Q9H0F5 AC068338.2-201ENST00000563278 1430 ntBASIC21.96■■□□□ 1.11
RNF38Q9H0F5 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.96■■□□□ 1.11
RNF38Q9H0F5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RNF38Q9H0F5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.95■■□□□ 1.1
RNF38Q9H0F5 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RNF38Q9H0F5 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
RNF38Q9H0F5 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
RNF38Q9H0F5 AC120498.10-201ENST00000621827 505 ntBASIC21.95■■□□□ 1.1
RNF38Q9H0F5 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF38Q9H0F5 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RNF38Q9H0F5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RNF38Q9H0F5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.95■■□□□ 1.1
RNF38Q9H0F5 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RNF38Q9H0F5 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF38Q9H0F5 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF38Q9H0F5 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.94■■□□□ 1.1
RNF38Q9H0F5 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF38Q9H0F5 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF38Q9H0F5 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF38Q9H0F5 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
RNF38Q9H0F5 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF38Q9H0F5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.94■■□□□ 1.1
RNF38Q9H0F5 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
RNF38Q9H0F5 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF38Q9H0F5 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF38Q9H0F5 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF38Q9H0F5 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF38Q9H0F5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF38Q9H0F5 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF38Q9H0F5 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF38Q9H0F5 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF38Q9H0F5 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF38Q9H0F5 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
RNF38Q9H0F5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.93■■□□□ 1.1
RNF38Q9H0F5 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF38Q9H0F5 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF38Q9H0F5 AC233723.2-201ENST00000623798 2106 ntBASIC21.93■■□□□ 1.1
RNF38Q9H0F5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms