Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.48■□□□□ 0.71
POLR2J2Q9GZM3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
POLR2J2Q9GZM3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
POLR2J2Q9GZM3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
POLR2J2Q9GZM3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.48■□□□□ 0.71
POLR2J2Q9GZM3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
POLR2J2Q9GZM3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
POLR2J2Q9GZM3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
POLR2J2Q9GZM3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
POLR2J2Q9GZM3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
POLR2J2Q9GZM3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.47■□□□□ 0.71
POLR2J2Q9GZM3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.47■□□□□ 0.71
POLR2J2Q9GZM3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
POLR2J2Q9GZM3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
POLR2J2Q9GZM3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.47■□□□□ 0.71
POLR2J2Q9GZM3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.47■□□□□ 0.71
POLR2J2Q9GZM3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.47■□□□□ 0.71
POLR2J2Q9GZM3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.47■□□□□ 0.71
POLR2J2Q9GZM3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.47■□□□□ 0.71
POLR2J2Q9GZM3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
POLR2J2Q9GZM3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR2J2Q9GZM3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.46■□□□□ 0.71
POLR2J2Q9GZM3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
POLR2J2Q9GZM3 AP006587.3-201ENST00000525742 1516 ntBASIC19.46■□□□□ 0.71
POLR2J2Q9GZM3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
POLR2J2Q9GZM3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR2J2Q9GZM3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR2J2Q9GZM3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR2J2Q9GZM3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.46■□□□□ 0.71
POLR2J2Q9GZM3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
POLR2J2Q9GZM3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
POLR2J2Q9GZM3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
POLR2J2Q9GZM3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR2J2Q9GZM3 AC003102.1-202ENST00000563394 1796 ntBASIC19.46■□□□□ 0.71
POLR2J2Q9GZM3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR2J2Q9GZM3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.46■□□□□ 0.71
POLR2J2Q9GZM3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
POLR2J2Q9GZM3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR2J2Q9GZM3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.46■□□□□ 0.71
POLR2J2Q9GZM3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR2J2Q9GZM3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR2J2Q9GZM3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2J2Q9GZM3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
POLR2J2Q9GZM3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2J2Q9GZM3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
POLR2J2Q9GZM3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2J2Q9GZM3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2J2Q9GZM3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.45■□□□□ 0.7
POLR2J2Q9GZM3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2J2Q9GZM3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.45■□□□□ 0.7
POLR2J2Q9GZM3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
POLR2J2Q9GZM3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2J2Q9GZM3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2J2Q9GZM3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.45■□□□□ 0.7
POLR2J2Q9GZM3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.45■□□□□ 0.7
POLR2J2Q9GZM3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2J2Q9GZM3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2J2Q9GZM3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
POLR2J2Q9GZM3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.45■□□□□ 0.7
POLR2J2Q9GZM3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
POLR2J2Q9GZM3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2J2Q9GZM3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2J2Q9GZM3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2J2Q9GZM3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2J2Q9GZM3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
POLR2J2Q9GZM3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
POLR2J2Q9GZM3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.44■□□□□ 0.7
POLR2J2Q9GZM3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR2J2Q9GZM3 AC133561.4-201ENST00000566112 224 ntBASIC19.44■□□□□ 0.7
POLR2J2Q9GZM3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR2J2Q9GZM3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR2J2Q9GZM3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.44■□□□□ 0.7
POLR2J2Q9GZM3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR2J2Q9GZM3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2J2Q9GZM3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2J2Q9GZM3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2J2Q9GZM3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR2J2Q9GZM3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2J2Q9GZM3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2J2Q9GZM3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2J2Q9GZM3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2J2Q9GZM3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2J2Q9GZM3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2J2Q9GZM3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.43■□□□□ 0.7
POLR2J2Q9GZM3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.43■□□□□ 0.7
POLR2J2Q9GZM3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
POLR2J2Q9GZM3 AL136116.3-201ENST00000402907 1138 ntBASIC19.43■□□□□ 0.7
POLR2J2Q9GZM3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.43■□□□□ 0.7
POLR2J2Q9GZM3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2J2Q9GZM3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.43■□□□□ 0.7
POLR2J2Q9GZM3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.43■□□□□ 0.7
POLR2J2Q9GZM3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
POLR2J2Q9GZM3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR2J2Q9GZM3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
POLR2J2Q9GZM3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.43■□□□□ 0.7
POLR2J2Q9GZM3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2J2Q9GZM3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
POLR2J2Q9GZM3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
POLR2J2Q9GZM3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
POLR2J2Q9GZM3 AL121603.2-201ENST00000557373 2117 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms