Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
VRK1Q99986 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VRK1Q99986 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
VRK1Q99986 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VRK1Q99986 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VRK1Q99986 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VRK1Q99986 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VRK1Q99986 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VRK1Q99986 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.56■□□□□ 0.56
VRK1Q99986 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VRK1Q99986 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VRK1Q99986 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.56■□□□□ 0.56
VRK1Q99986 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VRK1Q99986 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VRK1Q99986 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.56■□□□□ 0.56
VRK1Q99986 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.56■□□□□ 0.56
VRK1Q99986 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.56■□□□□ 0.56
VRK1Q99986 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.56■□□□□ 0.56
VRK1Q99986 NTF6G-201ENST00000591094 616 ntBASIC18.56■□□□□ 0.56
VRK1Q99986 AC022517.1-201ENST00000592429 346 ntBASIC18.56■□□□□ 0.56
VRK1Q99986 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
VRK1Q99986 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VRK1Q99986 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.56■□□□□ 0.56
VRK1Q99986 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VRK1Q99986 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VRK1Q99986 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.56■□□□□ 0.56
VRK1Q99986 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VRK1Q99986 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.56■□□□□ 0.56
VRK1Q99986 FBXW4P1-201ENST00000426721 2239 ntBASIC18.55■□□□□ 0.56
VRK1Q99986 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.55■□□□□ 0.56
VRK1Q99986 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
VRK1Q99986 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
VRK1Q99986 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VRK1Q99986 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VRK1Q99986 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VRK1Q99986 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VRK1Q99986 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VRK1Q99986 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VRK1Q99986 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VRK1Q99986 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
VRK1Q99986 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.55■□□□□ 0.56
VRK1Q99986 AC092053.2-201ENST00000640557 1818 ntBASIC18.55■□□□□ 0.56
VRK1Q99986 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
VRK1Q99986 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
VRK1Q99986 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VRK1Q99986 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VRK1Q99986 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VRK1Q99986 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VRK1Q99986 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
VRK1Q99986 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VRK1Q99986 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VRK1Q99986 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VRK1Q99986 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.54■□□□□ 0.56
VRK1Q99986 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VRK1Q99986 TERF1P2-201ENST00000583350 1212 ntBASIC18.54■□□□□ 0.56
VRK1Q99986 AL137784.2-201ENST00000607332 1000 ntBASIC18.54■□□□□ 0.56
VRK1Q99986 IKBKGP1-201ENST00000612193 1073 ntBASIC18.54■□□□□ 0.56
VRK1Q99986 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.54■□□□□ 0.56
VRK1Q99986 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
VRK1Q99986 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VRK1Q99986 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
VRK1Q99986 BX005040.4-201ENST00000637145 1518 ntBASIC18.54■□□□□ 0.56
VRK1Q99986 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VRK1Q99986 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VRK1Q99986 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VRK1Q99986 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VRK1Q99986 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VRK1Q99986 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VRK1Q99986 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VRK1Q99986 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.53■□□□□ 0.56
VRK1Q99986 OXCT2P1-201ENST00000447263 1535 ntBASIC18.53■□□□□ 0.56
VRK1Q99986 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
VRK1Q99986 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.53■□□□□ 0.56
VRK1Q99986 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
VRK1Q99986 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.52■□□□□ 0.56
VRK1Q99986 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VRK1Q99986 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VRK1Q99986 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
VRK1Q99986 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VRK1Q99986 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VRK1Q99986 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
VRK1Q99986 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
VRK1Q99986 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
VRK1Q99986 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VRK1Q99986 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VRK1Q99986 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
VRK1Q99986 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.52■□□□□ 0.55
VRK1Q99986 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.52■□□□□ 0.55
VRK1Q99986 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.52■□□□□ 0.55
VRK1Q99986 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VRK1Q99986 AC092667.1-201ENST00000434301 2586 ntBASIC18.51■□□□□ 0.55
VRK1Q99986 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VRK1Q99986 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.51■□□□□ 0.55
VRK1Q99986 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
VRK1Q99986 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.51■□□□□ 0.55
VRK1Q99986 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VRK1Q99986 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VRK1Q99986 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VRK1Q99986 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VRK1Q99986 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms