Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 MIR718-201ENST00000390190 70 ntBASIC21.37■■□□□ 1.01
CLDN23Q96B33 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLDN23Q96B33 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLDN23Q96B33 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
CLDN23Q96B33 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.37■■□□□ 1.01
CLDN23Q96B33 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.37■■□□□ 1.01
CLDN23Q96B33 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLDN23Q96B33 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLDN23Q96B33 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLDN23Q96B33 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CLDN23Q96B33 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLDN23Q96B33 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.36■■□□□ 1.01
CLDN23Q96B33 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.36■■□□□ 1.01
CLDN23Q96B33 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.36■■□□□ 1.01
CLDN23Q96B33 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.36■■□□□ 1.01
CLDN23Q96B33 AC060766.5-201ENST00000590539 871 ntBASIC21.36■■□□□ 1.01
CLDN23Q96B33 HLA-B-256ENST00000639848 1089 ntBASIC21.36■■□□□ 1.01
CLDN23Q96B33 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLDN23Q96B33 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.36■■□□□ 1.01
CLDN23Q96B33 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CLDN23Q96B33 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.36■■□□□ 1.01
CLDN23Q96B33 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLDN23Q96B33 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLDN23Q96B33 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.35■■□□□ 1.01
CLDN23Q96B33 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLDN23Q96B33 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.35■■□□□ 1.01
CLDN23Q96B33 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLDN23Q96B33 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.35■■□□□ 1.01
CLDN23Q96B33 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.35■■□□□ 1.01
CLDN23Q96B33 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.35■■□□□ 1.01
CLDN23Q96B33 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.35■■□□□ 1.01
CLDN23Q96B33 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.35■■□□□ 1.01
CLDN23Q96B33 MIR4497-201ENST00000583208 89 ntBASIC21.35■■□□□ 1.01
CLDN23Q96B33 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CLDN23Q96B33 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.35■■□□□ 1.01
CLDN23Q96B33 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.34■■□□□ 1.01
CLDN23Q96B33 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLDN23Q96B33 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLDN23Q96B33 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.34■■□□□ 1.01
CLDN23Q96B33 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.34■■□□□ 1.01
CLDN23Q96B33 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.34■■□□□ 1.01
CLDN23Q96B33 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.34■■□□□ 1.01
CLDN23Q96B33 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
CLDN23Q96B33 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLDN23Q96B33 KRT17P1-201ENST00000399211 1546 ntBASIC21.34■■□□□ 1.01
CLDN23Q96B33 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.33■■□□□ 1.01
CLDN23Q96B33 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLDN23Q96B33 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.33■■□□□ 1.01
CLDN23Q96B33 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
CLDN23Q96B33 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
CLDN23Q96B33 RPPH1-201ENST00000516869 333 ntBASIC21.33■■□□□ 1.01
CLDN23Q96B33 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.33■■□□□ 1.01
CLDN23Q96B33 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CLDN23Q96B33 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CLDN23Q96B33 AC100791.3-201ENST00000617619 330 ntBASIC21.33■■□□□ 1.01
CLDN23Q96B33 AC073912.3-201ENST00000624414 853 ntBASIC21.33■■□□□ 1.01
CLDN23Q96B33 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLDN23Q96B33 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLDN23Q96B33 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLDN23Q96B33 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLDN23Q96B33 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.33■■□□□ 1
CLDN23Q96B33 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.33■■□□□ 1
CLDN23Q96B33 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLDN23Q96B33 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CLDN23Q96B33 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLDN23Q96B33 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLDN23Q96B33 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.32■■□□□ 1
CLDN23Q96B33 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.32■■□□□ 1
CLDN23Q96B33 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.32■■□□□ 1
CLDN23Q96B33 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.32■■□□□ 1
CLDN23Q96B33 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.32■■□□□ 1
CLDN23Q96B33 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN23Q96B33 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CLDN23Q96B33 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN23Q96B33 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN23Q96B33 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN23Q96B33 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN23Q96B33 FAM21FP-204ENST00000608637 956 ntBASIC21.31■■□□□ 1
CLDN23Q96B33 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN23Q96B33 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLDN23Q96B33 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CLDN23Q96B33 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
CLDN23Q96B33 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLDN23Q96B33 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.31■■□□□ 1
CLDN23Q96B33 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLDN23Q96B33 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLDN23Q96B33 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLDN23Q96B33 AL355472.2-201ENST00000422958 438 ntBASIC21.3■■□□□ 1
CLDN23Q96B33 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLDN23Q96B33 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.3■■□□□ 1
CLDN23Q96B33 AC061975.6-201ENST00000579045 1553 ntBASIC21.3■■□□□ 1
CLDN23Q96B33 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN23Q96B33 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CLDN23Q96B33 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN23Q96B33 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.29■■□□□ 1
CLDN23Q96B33 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLDN23Q96B33 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLDN23Q96B33 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CLDN23Q96B33 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.29■■□□□ 1
CLDN23Q96B33 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms