Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMGB4Q8WW32 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.25■□□□□ 0.99
HMGB4Q8WW32 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMGB4Q8WW32 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMGB4Q8WW32 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMGB4Q8WW32 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMGB4Q8WW32 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.25■□□□□ 0.99
HMGB4Q8WW32 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMGB4Q8WW32 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMGB4Q8WW32 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HMGB4Q8WW32 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
HMGB4Q8WW32 KRT16P2-201ENST00000414673 1423 ntBASIC21.25■□□□□ 0.99
HMGB4Q8WW32 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
HMGB4Q8WW32 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HMGB4Q8WW32 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HMGB4Q8WW32 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.25■□□□□ 0.99
HMGB4Q8WW32 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
HMGB4Q8WW32 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.25■□□□□ 0.99
HMGB4Q8WW32 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HMGB4Q8WW32 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.25■□□□□ 0.99
HMGB4Q8WW32 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
HMGB4Q8WW32 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMGB4Q8WW32 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.25■□□□□ 0.99
HMGB4Q8WW32 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HMGB4Q8WW32 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMGB4Q8WW32 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
HMGB4Q8WW32 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HMGB4Q8WW32 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HMGB4Q8WW32 RBM17P2-201ENST00000616397 1405 ntBASIC21.24■□□□□ 0.99
HMGB4Q8WW32 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGB4Q8WW32 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
HMGB4Q8WW32 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
HMGB4Q8WW32 RARRES2P4-201ENST00000514074 484 ntBASIC21.24■□□□□ 0.99
HMGB4Q8WW32 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HMGB4Q8WW32 AL591742.1-201ENST00000604433 565 ntBASIC21.24■□□□□ 0.99
HMGB4Q8WW32 AC083880.1-201ENST00000608266 535 ntBASIC21.24■□□□□ 0.99
HMGB4Q8WW32 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HMGB4Q8WW32 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGB4Q8WW32 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGB4Q8WW32 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HMGB4Q8WW32 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.24■□□□□ 0.99
HMGB4Q8WW32 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.23■□□□□ 0.99
HMGB4Q8WW32 AC097658.1-201ENST00000475555 843 ntBASIC21.23■□□□□ 0.99
HMGB4Q8WW32 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.23■□□□□ 0.99
HMGB4Q8WW32 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
HMGB4Q8WW32 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.23■□□□□ 0.99
HMGB4Q8WW32 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.23■□□□□ 0.99
HMGB4Q8WW32 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.23■□□□□ 0.99
HMGB4Q8WW32 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.23■□□□□ 0.99
HMGB4Q8WW32 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.23■□□□□ 0.99
HMGB4Q8WW32 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGB4Q8WW32 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
HMGB4Q8WW32 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGB4Q8WW32 AC061975.6-201ENST00000579045 1553 ntBASIC21.23■□□□□ 0.99
HMGB4Q8WW32 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGB4Q8WW32 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
HMGB4Q8WW32 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
HMGB4Q8WW32 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGB4Q8WW32 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.22■□□□□ 0.99
HMGB4Q8WW32 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HMGB4Q8WW32 PRORSD1P-201ENST00000295112 541 ntBASIC21.22■□□□□ 0.99
HMGB4Q8WW32 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.22■□□□□ 0.99
HMGB4Q8WW32 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.22■□□□□ 0.99
HMGB4Q8WW32 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGB4Q8WW32 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.22■□□□□ 0.99
HMGB4Q8WW32 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HMGB4Q8WW32 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.22■□□□□ 0.99
HMGB4Q8WW32 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.22■□□□□ 0.99
HMGB4Q8WW32 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
HMGB4Q8WW32 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.22■□□□□ 0.99
HMGB4Q8WW32 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.22■□□□□ 0.99
HMGB4Q8WW32 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGB4Q8WW32 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.22■□□□□ 0.99
HMGB4Q8WW32 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGB4Q8WW32 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HMGB4Q8WW32 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
HMGB4Q8WW32 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGB4Q8WW32 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGB4Q8WW32 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.21■□□□□ 0.99
HMGB4Q8WW32 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.21■□□□□ 0.99
HMGB4Q8WW32 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
HMGB4Q8WW32 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.21■□□□□ 0.99
HMGB4Q8WW32 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
HMGB4Q8WW32 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGB4Q8WW32 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.21■□□□□ 0.99
HMGB4Q8WW32 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.21■□□□□ 0.99
HMGB4Q8WW32 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
HMGB4Q8WW32 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HMGB4Q8WW32 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGB4Q8WW32 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGB4Q8WW32 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGB4Q8WW32 AC010980.2-201ENST00000587099 1412 ntBASIC21.21■□□□□ 0.99
HMGB4Q8WW32 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.2■□□□□ 0.98
HMGB4Q8WW32 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGB4Q8WW32 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGB4Q8WW32 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGB4Q8WW32 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HMGB4Q8WW32 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGB4Q8WW32 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HMGB4Q8WW32 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms