Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC26.27■■□□□ 1.8
SSH3Q8TE77 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SSH3Q8TE77 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SSH3Q8TE77 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SSH3Q8TE77 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
SSH3Q8TE77 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SSH3Q8TE77 AC010141.2-201ENST00000452426 721 ntBASIC26.27■■□□□ 1.8
SSH3Q8TE77 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC26.27■■□□□ 1.8
SSH3Q8TE77 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SSH3Q8TE77 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SSH3Q8TE77 NARF-205ENST00000412079 1760 ntTSL 5 BASIC26.27■■□□□ 1.8
SSH3Q8TE77 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC26.27■■□□□ 1.8
SSH3Q8TE77 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SSH3Q8TE77 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC26.27■■□□□ 1.8
SSH3Q8TE77 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
SSH3Q8TE77 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SSH3Q8TE77 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SSH3Q8TE77 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC26.26■■□□□ 1.79
SSH3Q8TE77 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
SSH3Q8TE77 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SSH3Q8TE77 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SSH3Q8TE77 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
SSH3Q8TE77 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SSH3Q8TE77 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SSH3Q8TE77 AP001160.3-201ENST00000601484 763 ntBASIC26.26■■□□□ 1.79
SSH3Q8TE77 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SSH3Q8TE77 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
SSH3Q8TE77 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC26.26■■□□□ 1.79
SSH3Q8TE77 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SSH3Q8TE77 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC26.26■■□□□ 1.79
SSH3Q8TE77 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC26.26■■□□□ 1.79
SSH3Q8TE77 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC26.25■■□□□ 1.79
SSH3Q8TE77 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SSH3Q8TE77 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SSH3Q8TE77 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SSH3Q8TE77 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SSH3Q8TE77 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC26.25■■□□□ 1.79
SSH3Q8TE77 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC26.25■■□□□ 1.79
SSH3Q8TE77 KRT19P1-201ENST00000405746 1186 ntBASIC26.25■■□□□ 1.79
SSH3Q8TE77 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
SSH3Q8TE77 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SSH3Q8TE77 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC26.25■■□□□ 1.79
SSH3Q8TE77 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC26.24■■□□□ 1.79
SSH3Q8TE77 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SSH3Q8TE77 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC26.24■■□□□ 1.79
SSH3Q8TE77 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SSH3Q8TE77 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC26.24■■□□□ 1.79
SSH3Q8TE77 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SSH3Q8TE77 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC26.23■■□□□ 1.79
SSH3Q8TE77 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SSH3Q8TE77 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SSH3Q8TE77 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SSH3Q8TE77 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SSH3Q8TE77 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SSH3Q8TE77 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SSH3Q8TE77 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC26.23■■□□□ 1.79
SSH3Q8TE77 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SSH3Q8TE77 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC26.23■■□□□ 1.79
SSH3Q8TE77 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC26.23■■□□□ 1.79
SSH3Q8TE77 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SSH3Q8TE77 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SSH3Q8TE77 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
SSH3Q8TE77 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
SSH3Q8TE77 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
SSH3Q8TE77 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC26.22■■□□□ 1.79
SSH3Q8TE77 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SSH3Q8TE77 NAA20-201ENST00000310450 920 ntTSL 2 BASIC26.22■■□□□ 1.79
SSH3Q8TE77 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SSH3Q8TE77 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC26.22■■□□□ 1.79
SSH3Q8TE77 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
SSH3Q8TE77 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SSH3Q8TE77 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SSH3Q8TE77 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SSH3Q8TE77 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
SSH3Q8TE77 STX5-203ENST00000394690 1568 ntTSL 5 BASIC26.21■■□□□ 1.79
SSH3Q8TE77 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
SSH3Q8TE77 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
SSH3Q8TE77 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC26.21■■□□□ 1.79
SSH3Q8TE77 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC26.21■■□□□ 1.79
SSH3Q8TE77 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SSH3Q8TE77 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
SSH3Q8TE77 AC061975.6-201ENST00000579045 1553 ntBASIC26.2■■□□□ 1.79
SSH3Q8TE77 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
SSH3Q8TE77 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
SSH3Q8TE77 Z98882.1-201ENST00000622160 2253 ntBASIC26.2■■□□□ 1.78
SSH3Q8TE77 ME3-201ENST00000323418 1068 ntTSL 5 BASIC26.2■■□□□ 1.78
SSH3Q8TE77 STX7-201ENST00000367937 1090 ntTSL 5 BASIC26.2■■□□□ 1.78
SSH3Q8TE77 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC26.2■■□□□ 1.78
SSH3Q8TE77 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC26.2■■□□□ 1.78
SSH3Q8TE77 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
SSH3Q8TE77 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SSH3Q8TE77 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SSH3Q8TE77 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
SSH3Q8TE77 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SSH3Q8TE77 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SSH3Q8TE77 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC26.19■■□□□ 1.78
SSH3Q8TE77 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SSH3Q8TE77 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC26.19■■□□□ 1.78
SSH3Q8TE77 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC26.19■■□□□ 1.78
SSH3Q8TE77 AC022517.1-201ENST00000592429 346 ntBASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms