Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDND2Q8NHS1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDND2Q8NHS1 KRT18P11-201ENST00000435214 1283 ntBASIC17.93■□□□□ 0.46
CLDND2Q8NHS1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDND2Q8NHS1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDND2Q8NHS1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDND2Q8NHS1 RAP2CP1-201ENST00000605103 478 ntBASIC17.93■□□□□ 0.46
CLDND2Q8NHS1 AC104187.1-201ENST00000607510 612 ntBASIC17.93■□□□□ 0.46
CLDND2Q8NHS1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
CLDND2Q8NHS1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDND2Q8NHS1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDND2Q8NHS1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDND2Q8NHS1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDND2Q8NHS1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDND2Q8NHS1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDND2Q8NHS1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDND2Q8NHS1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
CLDND2Q8NHS1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDND2Q8NHS1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDND2Q8NHS1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDND2Q8NHS1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CLDND2Q8NHS1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CLDND2Q8NHS1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDND2Q8NHS1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDND2Q8NHS1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.92■□□□□ 0.46
CLDND2Q8NHS1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDND2Q8NHS1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDND2Q8NHS1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDND2Q8NHS1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CLDND2Q8NHS1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDND2Q8NHS1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CLDND2Q8NHS1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDND2Q8NHS1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CLDND2Q8NHS1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
CLDND2Q8NHS1 AP004607.7-201ENST00000527152 1677 ntBASIC17.91■□□□□ 0.46
CLDND2Q8NHS1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDND2Q8NHS1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDND2Q8NHS1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.91■□□□□ 0.46
CLDND2Q8NHS1 AC026185.1-201ENST00000445748 174 ntBASIC17.91■□□□□ 0.46
CLDND2Q8NHS1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDND2Q8NHS1 AC011767.1-201ENST00000617410 1153 ntBASIC17.91■□□□□ 0.46
CLDND2Q8NHS1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDND2Q8NHS1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDND2Q8NHS1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDND2Q8NHS1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDND2Q8NHS1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDND2Q8NHS1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDND2Q8NHS1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDND2Q8NHS1 OR7E47P-201ENST00000546390 1422 ntBASIC17.9■□□□□ 0.46
CLDND2Q8NHS1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDND2Q8NHS1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CLDND2Q8NHS1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDND2Q8NHS1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDND2Q8NHS1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.9■□□□□ 0.46
CLDND2Q8NHS1 HLA-L-209ENST00000420110 1011 ntBASIC17.9■□□□□ 0.46
CLDND2Q8NHS1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDND2Q8NHS1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.9■□□□□ 0.46
CLDND2Q8NHS1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDND2Q8NHS1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CLDND2Q8NHS1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.9■□□□□ 0.46
CLDND2Q8NHS1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.9■□□□□ 0.46
CLDND2Q8NHS1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDND2Q8NHS1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDND2Q8NHS1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDND2Q8NHS1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
CLDND2Q8NHS1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDND2Q8NHS1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CLDND2Q8NHS1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDND2Q8NHS1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDND2Q8NHS1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
CLDND2Q8NHS1 AC055733.4-201ENST00000638462 1354 ntBASIC17.9■□□□□ 0.46
CLDND2Q8NHS1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDND2Q8NHS1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CLDND2Q8NHS1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDND2Q8NHS1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDND2Q8NHS1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDND2Q8NHS1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDND2Q8NHS1 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.89■□□□□ 0.45
CLDND2Q8NHS1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDND2Q8NHS1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLDND2Q8NHS1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDND2Q8NHS1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDND2Q8NHS1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDND2Q8NHS1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CLDND2Q8NHS1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.88■□□□□ 0.45
CLDND2Q8NHS1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDND2Q8NHS1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDND2Q8NHS1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.88■□□□□ 0.45
CLDND2Q8NHS1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDND2Q8NHS1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.88■□□□□ 0.45
CLDND2Q8NHS1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.88■□□□□ 0.45
CLDND2Q8NHS1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDND2Q8NHS1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDND2Q8NHS1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDND2Q8NHS1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CLDND2Q8NHS1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDND2Q8NHS1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDND2Q8NHS1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDND2Q8NHS1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CLDND2Q8NHS1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms